| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00690 |
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| Symbol | |
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| ID | 8393961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 86598 |
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| End bp | 94085 |
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| Gene Length | 7488 bp |
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| Protein Length | 2495 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644984842 |
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| Product | putative cell wall binding protein |
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| Protein accession | YP_003142492 |
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| Protein GI | 257062820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCTTT CGCTGACGTT GGCGTTTTGC TCGGTTCCCG CATACGCCAT AGAGGCGGCG
GTATCCGACG ATGCCTCCGC TGCTGTGGAG GTGCAGGATT CCGAAGCGTC CGTCGCCGAG
GAGACGTCGT CGGCAGAAGG GGATGTTGCC GAGCCGACAG ACGAAGCGGC GAACCAGGAC
GAGCAAACGT CTGCCGAAGA GGAATATGAA GAAGCCGTTC CTGCCGAAGA TGTTGCGGTT
GCGGAGGGTG AAGAACCGTC TGCAGCCGAG CCTGAAGCCG CAGCCGAAGC GGACGAGGAA
GTCGTCGAAA CGCAGGCCGA AGGTGACGAG GCCATCGACG CTACCACCTG GGACGCTGCG
GACTTCACCT ATGGTACCTA CTCCCAGCTG TTCTACGGGT GCGACTATAC CCGCCAGCTT
ACGGTGGAGG GCGTCATCAT CACCGGATTC TCCGAGCGCG GCACGCAGAA GCTCGCACAG
AACACCGACC TGGTGATTCC CGCGGCCGAC GAGTCCGGCA ACCCGATCGT CGGCGTGGGC
AACAGCGCCT TCAAAGGCAT GGGGCTCACC TCGGTGACGT TCCCGGCCGA CAGGATGGTG
AACTACAACG ACGATGTGAC GTACCGCGTG ACGCAGCGCG GCGACTTCGT GATCTGCGAA
AACGCCTTCG CGAACAACAA CCTGACCAGC GTTGATCTGC CCAACGGCGT GCTGGCTGTC
ATGTCGTACG CGTTCAACGG CAACCAGCTG ACCACGGTCA CGCTGCCTCA GACCATCTGG
TGGATCGAGA CCATGTCGTT CGCGAACAAC CAGATCACCC AGGTGAATTT CCCGTCTACC
TGCTACTTCA TGCTTGAAAT GCACGGTATG GCGTTCGGAA ACAACCAAAT CACCTCGGTG
CGCCTGCCCG ACTACACCGA AGTCGTGAAC AAGGACACGT TCGCGTTCAA TCCCGGCGCC
GAGCCTATGC CTGAGGACGC GCCCGAGAAG TTCAAGACCT ACCAGGGCAA GACGGTCGGC
GTTGTGCACA TGTACGCCGT GGCCGGATTG GCTGAAAAGG ACCGCATCCA CCACATCGAC
CAGCCCACGG CAAGCACGAA ATCGTACTTC CAGAAGCTCA TTACCGACGG TCAGGAGCAG
GGCGACACGT CCAACGAATG GGTCGCGGCC GACTTCACGT TCGACGGCCA GACCATCACC
GGTCTTTCCG AAAGCGGCAT CGCCAAGCGC GCGACGCTGA AGAACCTGGT CCTGCCCGAC
CGCACGCGGT CGAACCTGCC GGTTAAGAAG ATCGCGGCCA GCGACAACTT CGACGGCGGC
TTGTTCGCCA CGGCGGATGA GCAGTTCGAG AGCGTGACGC TTCCCACCCA GCTCGTCGAG
GTGGGCGACA GGGCGTTCTG CGGCAGCGGC ATCACGAAGA TCGTGTTCTC CCAGAAGCTC
ACAACCATCG GTATGCAGGC CTTCGCGAAC AACAACCTGG TGTCGGTGTC GTTGCCGAAC
ACAGTGACCA CGCTTGGCCA AGGCGCGTTC GCAACGAACC CCACCCTTTC CTCCGTCAAG
CTGTCCACCG CGCTGACCGA GATTCCCGGC GGCGCCTTCG GATGCAGCGC CAAAGACACG
TGGATGCCGA ACCTGACGTC CATCGAGCTG CATGAAGGCA TCGTCACCAT CGGCGACAAC
GCCTTCGCGG GCAACAACTT CAAGGAGATT ACGCTTCCGT CCACGGTGAA GACTGTCGGT
CGCTTCGCAT TCTCGTCGAA GAACTACCTG ATGGAAGAGG GCGGCGAGCC GAATTACTGC
TCGCTCACGC TGAACGAGGG GCTCGAAAGC ATCGGCAGCC GCGCATTCCG CAACAAGGCA
ATCGCCGAGG TCACGCTGCC CACCACGCTG ACGAGCCTGC CCGGAGAGAG CAACGACCCG
TTCACCAAGG AGTTCTCGGG CGGCGCGGAG ACGGTGCTCA CCAAGGTGTA CGTGACCGCC
AAGGCTCAGT ACGACGACAA GACGAACTTT GCCAACACGA AGTACCGCCA CGTGTATTAC
CTGGGGGACG AATGGACGGC CGAAGACTTC ACGTACGGCG ACCTTGACCT GGACGTCGAA
GGCATCCAGA CCATCGGCGG CGCAAAGCTT ATCGGTACGG TCCATGCCAT CACGGGCCTG
AGCGAAGTCG GCCTGAAGAA GGTCGAAACC AACAAGGATT TGGTGCTTCC CTCCGTTGAC
GCCGACGGCG TGAAGATCCA AGGCATTGGC AAGTACGCCT TCAAGGGTCA AGGTATCGAA
AGCATCGAGT GGCCCACCAT CACCGTGAAC GACGAAAGCG GCACCTGGGA CGCCGACATG
GCCGATCGCG GCTACTTCTT CATCGGCTAC GGCGCATTCG ACAACAACAA GCTTACGACC
ATCGAGATTC CCGAGGGCAC GTTGAGCATC GGTACGTATG CGTTCCGCGG CAACGTTGCC
ACGAAGGTGG CCTTGCCTGA AAGCATTCAA ACCATCGCTA CCGGGGCCTT TGCCAAGAAC
AACATCGTGC TGGTGGAATT CCCGAGTGAA ACCACCTACC CGACCACCAT CGGCATGCAG
TCGTTCTTGG GGAACCAGAT CCAGTCGCTG CGCATTCCCA ACAATGCCGA AACGGTAAAT
AAGTTTGCGT TCATGCAGAA CACCGGCATG GAGCCGATTA CCTGGGGCAA TGTGAACGAG
AATAAGGGCG GTCTCGTCCA TATGTACGTG GACAGCCCTG ACAACCTGGG CGGGAACGTT
AGCTATAGGT CGGCCGGCAC TTCCAACGTG CAGGAGCTCG TAGTGGGCGA CATGCCCAGC
CAGTTCGGCC CGTGGTGCGC GGACGACTTC ACCTTCGACG GCGCAACGGT GACCGGCCTG
TCTGAACAGG GCAAGCTCAA GGTCAAGCTC AATCCGGCCA TGGTCATTCC CGACACGACC
GCTGATGGTA CGCCCGTTAC CGCAATCGGC CCCGGCCAGA TGGGCAAGGG TACCTTCTAC
TGCGACGAGA CCGTGGCAGC CGAAGACGGT ACGGAGACGA CCACTACCTA CGTTCCCACG
AGCGTGGTGT TCCCGTCGAC GCTGACGACC ATCGGCGACC GTGCATTCTC CGCGGCCGAA
AGGGACCTTT CCAAAGGTGA GTATGCAGGC CTGACCAGCG TCAACCTGCC TGAAAGCGTG
ACGAGCATCG GCATGATGGC GTTCCAGAAC GCACCGATCA GCGGCGCGCT CAAGCTGCCC
GCAGGGTTGA CGACGCTCGG TGCCGGCGCC TTCGTGACCA ACGACAAGAC GACGGCCAAG
ATCACCTCCG TCAACATCCC CGAAGGCCTT ACGACCATTC CTGCGAATGC GTTCAACTGC
CAGGCCATCG ACGAGATCGT CATTCCCGAA GGCGTCACGA AGATCGACCA GCGTGCGTTT
GCGGGCAACT TCTCCACGAA GCTGAGCCTG CCTTCGACGC TGACCAGCAT CGGCAACTAC
GCCTTCATGA ACCACCAGTT CGAAACCATC GAGCTGCCGG AATCCGTCAC GAGCGTCGGC
AACTACGCCT TCCAGATTTC GAATGAGAAC CTGCAGCCCA TGCCTACGAA GCTCGTGTTC
AACAACGGGC TCACGTCGGT GGGCAACAAG TCGTTCGCTG GCAGCGGCGT TGCATCCGCC
ACGCTGCCCG GCACCGTGAC GACGCTGCAC AAGGATGCGT TCGCGGGCTC CGCCCAGACG
GTGACGCTGT ACACGGCGAC GCCTCTTGAC GAGCTTGCAG CGAGCAGCCC GAAGGTGGTG
CAACAGGGCA CGAGCCACCA GGTGGTTTAC AGCTCGATCG CCGATTCCCC GTGGAGCGCG
GACGACTTCA CCTACAGCGA AGACAACGCT ACCATCACGG GCTTGACCGA CTCGGGCAAG
GCGAAGCGCC TGCAGAACCA TGAGCTCATC CTACCCGAAA CCGGACCGGA CGGCACCACG
CCCATTACCG GCATCGCCGA CGCCGCATTC GCCATCGTGC TTGAAGGCGA TTCGGCCGTC
GACCTGTCCG GCGCCGATGA CCCGGTCGCC GAGCTTTCGA AGTTCGGCTC CATCTCCAAG
AACGGCTTCA CGAGCGTGCA GCTGCCCAGC GGCCTGGTCT CCATCGGCGA CCGTGCCTTC
GAGTACAACG CGCTCAAGTC CGTCGACTTG GCCGCCGCGC CTGGCCTGAC CACCATCGGT
AACATGGCCT TCCACGGCAA CCAGCTGCAG TCGCTGGTCA TCCCCGACAG CGTTACCGAC
CTGGGCACCG GCGCCTTCGC CATGAACGCC CTGCTCAGCT TGACGCTGTC CAAGAACGTG
ACCGTCATTC CCGCCGGTGC GTTCTCCATG AACATCTGGC TGTCCAGCGT AACCATCCCC
GACACCGTGA CCGAAATCGG CCAGACGGCG TTCGCGGGCG CGAGGCTCAC GAGCCTCGAG
ATTCCGGCGT CCGTCACCAA GATCGGCCGC AAGGCGTTCC ACCTGCATCG CATCACGAGC
CTGACCATCC CGGGCACGGT TAAGGAGCTC GGCGAATCCG CATTCGAAGG CACCTACAAG
GGTCTGGCGC TCAAGAGCCT GACGCTTGAA GAGGGCATCG AGTCCATCGG CGACCGCGCC
TTCAAGGAAG GCCTGCTCGA AACCGTGGCG CTGCCCAGCA GCCTGAAGAC GCTCGAGGGC
GAACCCTTCG AGAACAACAA GGGCGAGAAC GGCTCCCATG TGGTGCTGCT GACCTCCGAG
AATCCTGATC ACGCAGCTTT CAACGGGGCC AATTTCCACA AGGTGGCAAT CGACATCTCC
GCCGCCGAAG TGACCGTTGA AGGCACCGTG GTGTACACGG GCAAGGCGCA GGAGCCCGCT
CTGAAGGTGA CGCTCGACGG CGTCGAGATT CCCGCCGAGG GCTACACGGT CGAGTATGCC
GACAACGTCG AACCCGGCAC CGCCACAGTC ACCGTTACAG GCAAGGACGC CTTCACGGGC
ACCGCAACCG GAACGTTCGA GATCCAGGAC GTGTGGACCC TTGAGGACTT CACCATCGAC
GGCACGGTCA TCACGGGCCT GACCGACTCC GGCAAGGCCA AGCTGAAGAC CACCACCACG
ATGGTGATGC CCAGCAAGAA CGCCGACGGA CAGGACATTA CCGAAATCGG CGCAGGTTCG
TTCAACAACC ACCTGTTCGC CTACGAGGAG GACGGCGCGC AGTACTATCC GACCAGCGTG
ACGCTTCCCG CCAACCTGCA GAAGATCGGC GGCTATGCAT TCCAGGGTAT CCTCGTCGAC
TCCACCGCTG CGCCGAAGGT GTACGGCGGC GTGACCCAGA TCGAGTTCCC CGAGACGCTC
GTCGAGATCG GCAGCAACGC GTTCCAGAAC GCGCCCATCA GCGGCAACGT GGTCATCCCC
GAAAACGTGA CGACCATCGG CAACGCCGCC TTCATGACGC AGGGCGCGCC GCTGATTACG
GGCATCACGC TGCCGACGGG CCTTACCGCC ATCCCGGCTT CGCTGGCCGG CGGCCAGGCC
ATTTCCGAAG TGGGCATTCC CGACAAGGTG GAGACCATCG GCGCCAGCGC ATTCGCGGGC
TGCCCCATCG TTTCGGTGGA CATCCCGGCC AGCGTGACCA GCATCGGCAG GAGCGCCTTC
GCCGGCGTCA GCTCGAACCC GACGCTGGAA TCCATCACGC TGCATGAGGG GCTGCAGACC
ATCGACAGGC AGGCGTTCGC GTATTCCAAG GTCGCATCGG CGCAGCTGCC TGCCTCAGTG
GCAACCCTGC ACAAGGACGC GTTCAAGAAC TCCGAGCAGC CGGTGCTCCT GTACACCGAC
CTGCCCTACA GCGAGCTGGC CAGCGGCGTG GTGAAGGTGG GCTCCGGACA CGAGGTCGTC
TCCATCGCCG ATTGGGAGGC CGCCGACTTC ACCAGCTCCG AGGACGGCAC CACCGTCACC
GGACTGACCG AGCGCGGCAT GGCCAAGCTG GAGAAGAACC CCAACCTGGT CATTCCCGAA
CAGCTGGTTG ACGGCGTGAA CGTTACCGCC ATCGGCGACA TGGCGTTCCG CGCCAACGCG
CTTCTGGAAA GCGTGTCGAT GCCCGACACC ATCACCACGA TGGGCAACGC GGCATTCAAC
AGCTGCCCGA AGCTTACGAG CGTGAAACTG TCCGCAGGCC TGACGGCCAT TCCGGATGCG
GCGTTCCTAC AGAACGACGC GAATGCGCAA GGTATTGACG AGCTGGTCAT TCCCGAGGGC
GTCACCAGCA TCGGCCGGAA CGCGTTCGCG GGCACGAAGG TGACCAAGCT CACCCTGCCC
AGCACGCTTG AGACCATCGG CGACAGCGCA TTCCTCAACA ACCAGATCGC CGAGCTTGAG
ATCCCTGCCA GCGTGAAGAC CATCGGCAAG AGCGCGTTCT CCGTTGCTCG CGCCGAAAAG
GGCAGCCTGC CTCGCACGCT TGAGAAGCTG ACCCTGAACG AGGGCCTCGA GACCATCGAA
GCGAACGCGT TCCGCTGCAG CAAGCTGGAC GCGGTGGCGA TTCCCGCGAC GCTGACGACG
CTGCACAAGG ACGCGTTCAA GAGCGGCGAC ACCGAGGTCG GCGCAGGTGC GGGCGGCAAG
GTCCTGCTCA CCAGCGGCGT GATGGACCAG GTGACGGCAA CCGGCGATTA CACCGGCATC
GTCGCCGACG GCACGTGCCA CGTGGTCGCG TTCGACCTGG AAGAAGCCCA GGACGAGGTT
ACGATTGCGA TTGACCCCGA AACCGCCCCC TACACCTCCG CCGCCATCGA ACCCGCCGTC
ACCGTGAAAC TCGGCGACAC CGAGCTTACG GCCGGCACCG ACTACGAGCT GACCTTTGCC
GACAACGTCG AGCCTGGCAC CGCCACGGCA ACTGTGACGG GCAAGGGCAC CTTCACCGGC
AGCGTGTCCG GCACCTTCGC CATTCAGGCC AAGGCGGGTT GGTTCAAGAC GCCCGACGCC
CAGTGGTACT ACTTCAAGGA CGCCGACGGC ACCAAGGCAA GCGGCTGGCT TGAGGTTAAG
GACAAGTGGT ATTACTTCGA CCCGGCCACA AAGCTCATGC TGACCGGCTG GCAGAAAATG
AAGGACAAGT GGTATTACCT GGGCACCAAC GGCGCCATGG TCACGGGTTG GAACAAGATC
GGCACCAGCT GGTACTGGTT CAAATCCGGC GGCCAGATGG TGACTGGCTG GAACAAGATC
GGTTCTAGCT GGTACTGGTT CAAGCCCGGC GGCCAGATGG TCACAGGCTG GAAGGAAATC
AACGGCAAGT GGTACTGGTT CAAGGACGGC GGCCAGATGG TCACCGGCTG GCAGAAGATT
TCCAACAAGT GGTATTACTT CGAGAGCTCC GGCGCCATGA AGACCGGCTG GCTGAAGCTT
GATAACAAGT GGTACTACAT GAACACCTCT GGAGCCATGG TTACCGGTAC GCAGACCATT
GACGGCAAGA CCTACCGCTT CAACTCGAGC GGTGTTTGGG TCTCGTAA
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| Protein sequence | MLLSLTLAFC SVPAYAIEAA VSDDASAAVE VQDSEASVAE ETSSAEGDVA EPTDEAANQD
EQTSAEEEYE EAVPAEDVAV AEGEEPSAAE PEAAAEADEE VVETQAEGDE AIDATTWDAA
DFTYGTYSQL FYGCDYTRQL TVEGVIITGF SERGTQKLAQ NTDLVIPAAD ESGNPIVGVG
NSAFKGMGLT SVTFPADRMV NYNDDVTYRV TQRGDFVICE NAFANNNLTS VDLPNGVLAV
MSYAFNGNQL TTVTLPQTIW WIETMSFANN QITQVNFPST CYFMLEMHGM AFGNNQITSV
RLPDYTEVVN KDTFAFNPGA EPMPEDAPEK FKTYQGKTVG VVHMYAVAGL AEKDRIHHID
QPTASTKSYF QKLITDGQEQ GDTSNEWVAA DFTFDGQTIT GLSESGIAKR ATLKNLVLPD
RTRSNLPVKK IAASDNFDGG LFATADEQFE SVTLPTQLVE VGDRAFCGSG ITKIVFSQKL
TTIGMQAFAN NNLVSVSLPN TVTTLGQGAF ATNPTLSSVK LSTALTEIPG GAFGCSAKDT
WMPNLTSIEL HEGIVTIGDN AFAGNNFKEI TLPSTVKTVG RFAFSSKNYL MEEGGEPNYC
SLTLNEGLES IGSRAFRNKA IAEVTLPTTL TSLPGESNDP FTKEFSGGAE TVLTKVYVTA
KAQYDDKTNF ANTKYRHVYY LGDEWTAEDF TYGDLDLDVE GIQTIGGAKL IGTVHAITGL
SEVGLKKVET NKDLVLPSVD ADGVKIQGIG KYAFKGQGIE SIEWPTITVN DESGTWDADM
ADRGYFFIGY GAFDNNKLTT IEIPEGTLSI GTYAFRGNVA TKVALPESIQ TIATGAFAKN
NIVLVEFPSE TTYPTTIGMQ SFLGNQIQSL RIPNNAETVN KFAFMQNTGM EPITWGNVNE
NKGGLVHMYV DSPDNLGGNV SYRSAGTSNV QELVVGDMPS QFGPWCADDF TFDGATVTGL
SEQGKLKVKL NPAMVIPDTT ADGTPVTAIG PGQMGKGTFY CDETVAAEDG TETTTTYVPT
SVVFPSTLTT IGDRAFSAAE RDLSKGEYAG LTSVNLPESV TSIGMMAFQN APISGALKLP
AGLTTLGAGA FVTNDKTTAK ITSVNIPEGL TTIPANAFNC QAIDEIVIPE GVTKIDQRAF
AGNFSTKLSL PSTLTSIGNY AFMNHQFETI ELPESVTSVG NYAFQISNEN LQPMPTKLVF
NNGLTSVGNK SFAGSGVASA TLPGTVTTLH KDAFAGSAQT VTLYTATPLD ELAASSPKVV
QQGTSHQVVY SSIADSPWSA DDFTYSEDNA TITGLTDSGK AKRLQNHELI LPETGPDGTT
PITGIADAAF AIVLEGDSAV DLSGADDPVA ELSKFGSISK NGFTSVQLPS GLVSIGDRAF
EYNALKSVDL AAAPGLTTIG NMAFHGNQLQ SLVIPDSVTD LGTGAFAMNA LLSLTLSKNV
TVIPAGAFSM NIWLSSVTIP DTVTEIGQTA FAGARLTSLE IPASVTKIGR KAFHLHRITS
LTIPGTVKEL GESAFEGTYK GLALKSLTLE EGIESIGDRA FKEGLLETVA LPSSLKTLEG
EPFENNKGEN GSHVVLLTSE NPDHAAFNGA NFHKVAIDIS AAEVTVEGTV VYTGKAQEPA
LKVTLDGVEI PAEGYTVEYA DNVEPGTATV TVTGKDAFTG TATGTFEIQD VWTLEDFTID
GTVITGLTDS GKAKLKTTTT MVMPSKNADG QDITEIGAGS FNNHLFAYEE DGAQYYPTSV
TLPANLQKIG GYAFQGILVD STAAPKVYGG VTQIEFPETL VEIGSNAFQN APISGNVVIP
ENVTTIGNAA FMTQGAPLIT GITLPTGLTA IPASLAGGQA ISEVGIPDKV ETIGASAFAG
CPIVSVDIPA SVTSIGRSAF AGVSSNPTLE SITLHEGLQT IDRQAFAYSK VASAQLPASV
ATLHKDAFKN SEQPVLLYTD LPYSELASGV VKVGSGHEVV SIADWEAADF TSSEDGTTVT
GLTERGMAKL EKNPNLVIPE QLVDGVNVTA IGDMAFRANA LLESVSMPDT ITTMGNAAFN
SCPKLTSVKL SAGLTAIPDA AFLQNDANAQ GIDELVIPEG VTSIGRNAFA GTKVTKLTLP
STLETIGDSA FLNNQIAELE IPASVKTIGK SAFSVARAEK GSLPRTLEKL TLNEGLETIE
ANAFRCSKLD AVAIPATLTT LHKDAFKSGD TEVGAGAGGK VLLTSGVMDQ VTATGDYTGI
VADGTCHVVA FDLEEAQDEV TIAIDPETAP YTSAAIEPAV TVKLGDTELT AGTDYELTFA
DNVEPGTATA TVTGKGTFTG SVSGTFAIQA KAGWFKTPDA QWYYFKDADG TKASGWLEVK
DKWYYFDPAT KLMLTGWQKM KDKWYYLGTN GAMVTGWNKI GTSWYWFKSG GQMVTGWNKI
GSSWYWFKPG GQMVTGWKEI NGKWYWFKDG GQMVTGWQKI SNKWYYFESS GAMKTGWLKL
DNKWYYMNTS GAMVTGTQTI DGKTYRFNSS GVWVS
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