Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00610 |
Symbol | |
ID | 8393953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 78968 |
End bp | 79585 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644984835 |
Product | transcriptional regulator |
Protein accession | YP_003142485 |
Protein GI | 257062813 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.309946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAAGA ATCTGCCGGA AGCCGAAAAC GGACACGAGG AAAACCTGCG AGATAGCAGC ACGAACACGG ATAGCGACCG CGTGCTTGTG ACCAAGCGGG CCGTGTTCCT TGCGCTTTGC GCCCTGGTGG AGGAACGCGA CTTCAGTGCC ATCACCGCCA GCGACATCAT GAAGCGGGCG GGCGTTTCAC GATCCACGTT CTACCGTTGC TTCGCAGATA AATACGACGT CGTGAACTGG TCTTTCAAGC GTTACAAGAA TATCCGCATC CAGGACGTCG AACAATACCA TGATTTCTCG ACGGCGCTGT ATGCCCAGCT TCTGCATCTG AAGGAATACC GCACCTGCTA CGCGTCGGCG CTTCGGTATC TGGGGCAGAA TTCGCTGCGC GACTACATGT TCGAGGCCAA CGACGAATAC ATGTTGGAAT GCTGGCACGC CGAGCACGGC CCCGACGAGG TGTCGCTTGA GAAGCGCGTC ATGATTCGCT TCGCGGCAGC CGGATGCTCC AAGGTGGTTG AGCAGTGGGT TCTTGGCGGC TGTGTCGAGG AGCCGCAAAG CGTGGTGGAC GCCCTTGTGG CAACCATACC TACCGAGGTG CTGGAAACGC TCTTCTAA
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Protein sequence | MGKNLPEAEN GHEENLRDSS TNTDSDRVLV TKRAVFLALC ALVEERDFSA ITASDIMKRA GVSRSTFYRC FADKYDVVNW SFKRYKNIRI QDVEQYHDFS TALYAQLLHL KEYRTCYASA LRYLGQNSLR DYMFEANDEY MLECWHAEHG PDEVSLEKRV MIRFAAAGCS KVVEQWVLGG CVEEPQSVVD ALVATIPTEV LETLF
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