| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00520 |
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| Symbol | |
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| ID | 8393944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 70788 |
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| End bp | 71867 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644984826 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_003142476 |
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| Protein GI | 257062804 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.768051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATC TGAACAGCTT CCGCGACCCT GAGCTTGCAA AGGGCCTGAT CAAGTCCATA
AACGCCTTCG CACCCGAACA TGCCACCCTG ATGGAGGTCT GTGGCACCCA CACCGTTGCC
ATCGCCCGCA ACGGCATCCG CAACCTGATG CCCGAAGGCA CCCGCCTGGC GTCCGGCCCG
GGGTGCCCCG TGTGCGTGAC CGCCAACGTC GACATCGACA TGGCCATTTC GCTATGCCGC
GTGCCCGACG CCATCATCAC CACCTTCGGC GACATGACCC GCGTGCCCGG CAGCACATCT
TCCCTCAACA AAGAGAAGGC CGACGGCCGC GACATACGCA TCGTGTACTC GCCGCTGGAC
GCGCTCAAAA TCGCCCAGGA GAACCCCGAG CGCCAGGTCA TCTTCATCGG CGTCGGCTTC
GAAACCACCA CGCCGCTGGT GGCCATGGCC ATCAAGCGCG CGAAGGCGGC CGGGCTCAAG
AACTTCAGCG TGTTCGCGGC GCACAAGAAC ATGCCGAACG CCCTGGACGT CATCATGAGC
GACCCCGAGC TGCAGGTGGA CGCGCTCATT TTGCCTGGTC ACGTCAGCAC CATCATCGGT
ATGGAGCCCT ACAGGTTCCT GGCCGAGAAA TACCACATTC CCGGCGTCAT CTCCGGCTTC
GAGCCGGTGG ACGTGCTGGC CGCCATCGCC ATGATCATGC GCCAGCTTCA CGAGGGGCGC
GCCGAGATCG AAAACGCCTA CGGACGCGGC GTCATGCCCC AGGGCAACCC CGTGGCCATG
GCCGCCATCG ACGAGGTGTT CGACACCTGC ACCGCCACCT GGCGCGGGCT TGGCCCCATC
GAAGGCAGCG GCTACCGCAT CCGCCCCGAG TTCGCCGACT TCGACGCAGC CCTGCGCTTC
GATCCGCCGG TGGAGCCCAC CCGCGAGCAT CGCGGCTGCC GCTGCGGCGA TGTGCTGCGC
GCCCGCATGG CCCCCGACGA GTGTCCGCTG TTCCGCAAGG TGTGCACCCC CGAAAACCCC
GTGGGCCCCT GCATGGTGAG CTCCGAAGGC TCCTGCGCCG CCTACTTCCG CTACTACTAG
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| Protein sequence | MVDLNSFRDP ELAKGLIKSI NAFAPEHATL MEVCGTHTVA IARNGIRNLM PEGTRLASGP
GCPVCVTANV DIDMAISLCR VPDAIITTFG DMTRVPGSTS SLNKEKADGR DIRIVYSPLD
ALKIAQENPE RQVIFIGVGF ETTTPLVAMA IKRAKAAGLK NFSVFAAHKN MPNALDVIMS
DPELQVDALI LPGHVSTIIG MEPYRFLAEK YHIPGVISGF EPVDVLAAIA MIMRQLHEGR
AEIENAYGRG VMPQGNPVAM AAIDEVFDTC TATWRGLGPI EGSGYRIRPE FADFDAALRF
DPPVEPTREH RGCRCGDVLR ARMAPDECPL FRKVCTPENP VGPCMVSSEG SCAAYFRYY
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