Gene Shel_00260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00260 
Symbol 
ID8393918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp34751 
End bp35497 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID644984800 
Productputative stress-responsive transcriptional regulator 
Protein accessionYP_003142450 
Protein GI257062778 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAAA CCGCAAAACA TCTTGTGCGC TCGGACAACT CCGTTGTTGC CGGGGTCTGC 
GCCGGACTTG CGGAAACGCT GGACACCGAT CCCATTGTCA TGCGCGTGCT GGGCATCCTG
CTTACCGTGC TTACCTTCGG CTGGGGCGTG ATTGCCTACG TCATCCTGTG GGTTGTTTTG
CCCAAGGGCC AGGCCTGCGC CGACTGCATC GACGTTTCTG CAGATAGCGA GGATCCCTGC
GGATGCAGGG ACGCCTCGGT CCATATGCCG AAAAGCGCCT ATCTCGGCAC GTCGGTGGGT
GTCGTTCTGG TGTGTCTGAT TTTCGCCGTG CTGTTGGATT ACCTGGTGGT GGACGCCTCC
TGGTATCAGT TCTGGCCAAT CGTGTTTGTG GCGGCCGGCT TCACGGTCAT GGTTATCCCC
ATCGATGAGG ACCACCAGGT TTTCGAGATG GCCGTCGGTA TGACGCTGGT GGGCGTCGGT
GCCGTGCTCA CGCTGTGTTC CGTCGGCTTC CTGTCGTGGC AAACCATCCC GCACGCGCTT
CCGCGGGTGC TGCCGATCCT GTTGCTTGCG GCCGTGGTGG CCGTGCTTGC CCACCGTCGC
CACAACCGGG TGCTTACGTT CTGCGCCGGC GCGCTGGTGC TTGTCGCATG CGCGCTCACC
GTCACGGTGT TCGGAGTTCC GAACGAGATG GATTTCATCG TGTTGCAGAA CCCCATGGGC
GGTCCGAAGA CCATTTTCTA CCGCTAA
 
Protein sequence
MAETAKHLVR SDNSVVAGVC AGLAETLDTD PIVMRVLGIL LTVLTFGWGV IAYVILWVVL 
PKGQACADCI DVSADSEDPC GCRDASVHMP KSAYLGTSVG VVLVCLIFAV LLDYLVVDAS
WYQFWPIVFV AAGFTVMVIP IDEDHQVFEM AVGMTLVGVG AVLTLCSVGF LSWQTIPHAL
PRVLPILLLA AVVAVLAHRR HNRVLTFCAG ALVLVACALT VTVFGVPNEM DFIVLQNPMG
GPKTIFYR