Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00260 |
Symbol | |
ID | 8393918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 34751 |
End bp | 35497 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644984800 |
Product | putative stress-responsive transcriptional regulator |
Protein accession | YP_003142450 |
Protein GI | 257062778 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGAAA CCGCAAAACA TCTTGTGCGC TCGGACAACT CCGTTGTTGC CGGGGTCTGC GCCGGACTTG CGGAAACGCT GGACACCGAT CCCATTGTCA TGCGCGTGCT GGGCATCCTG CTTACCGTGC TTACCTTCGG CTGGGGCGTG ATTGCCTACG TCATCCTGTG GGTTGTTTTG CCCAAGGGCC AGGCCTGCGC CGACTGCATC GACGTTTCTG CAGATAGCGA GGATCCCTGC GGATGCAGGG ACGCCTCGGT CCATATGCCG AAAAGCGCCT ATCTCGGCAC GTCGGTGGGT GTCGTTCTGG TGTGTCTGAT TTTCGCCGTG CTGTTGGATT ACCTGGTGGT GGACGCCTCC TGGTATCAGT TCTGGCCAAT CGTGTTTGTG GCGGCCGGCT TCACGGTCAT GGTTATCCCC ATCGATGAGG ACCACCAGGT TTTCGAGATG GCCGTCGGTA TGACGCTGGT GGGCGTCGGT GCCGTGCTCA CGCTGTGTTC CGTCGGCTTC CTGTCGTGGC AAACCATCCC GCACGCGCTT CCGCGGGTGC TGCCGATCCT GTTGCTTGCG GCCGTGGTGG CCGTGCTTGC CCACCGTCGC CACAACCGGG TGCTTACGTT CTGCGCCGGC GCGCTGGTGC TTGTCGCATG CGCGCTCACC GTCACGGTGT TCGGAGTTCC GAACGAGATG GATTTCATCG TGTTGCAGAA CCCCATGGGC GGTCCGAAGA CCATTTTCTA CCGCTAA
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Protein sequence | MAETAKHLVR SDNSVVAGVC AGLAETLDTD PIVMRVLGIL LTVLTFGWGV IAYVILWVVL PKGQACADCI DVSADSEDPC GCRDASVHMP KSAYLGTSVG VVLVCLIFAV LLDYLVVDAS WYQFWPIVFV AAGFTVMVIP IDEDHQVFEM AVGMTLVGVG AVLTLCSVGF LSWQTIPHAL PRVLPILLLA AVVAVLAHRR HNRVLTFCAG ALVLVACALT VTVFGVPNEM DFIVLQNPMG GPKTIFYR
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