| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00240 |
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| Symbol | |
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| ID | 8393916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 31619 |
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| End bp | 33640 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644984798 |
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| Product | predicted membrane protein |
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| Protein accession | YP_003142448 |
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| Protein GI | 257062776 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.32403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGC CGCAGTTCAA CAACCAGCAG AACGGCCCGC AGATGCCGCC AGCAGGATGG
CCCCAATCCC AGGTCCAGCC GACGGGCCAG GCTCGGGTTC AGCCCCAGCT GCCTCAGCAG
CCCGCCGCGC CCCAGCCCCA GGTTCAGCCG CAGCCCCAGG CACCCCAGCC TGTCGACTAC
CGCGAGACAG TCCCCGAGCC GCTGCGACCC GGCATGCACC AGGTTCATCA CGCGTTCATT
TGGATCAAAG GCATAGGCTC GGCCGTCGGT ATCGTCTTCG CCATGGCCAT CACGGCCTTC
GGCAATCTCA TGTCCGCGGG GCTCGGAGAG CTTGGCGCGT TCATCGTGTT CCTTATCTTG
GGCCTGACCA TCCTTGTTAC GGTGGGTCTT GTATTTCTGT TCCGTTGGAT CAGCTGGAAA
TACCTGTCGT ACGCGCTGAC CCCCACCGAG ATCGAGGTGC ATTCCGGTTG GCTCAACAAA
AAGCGCGTCC ACGTCCCCTA CCAGCGCATT CAGTCCGTCA ACCAAACCGC GACGCCGCTG
CAGCGCGTCG TGGGCATATG CGACGTGAGC GTGGATACCG CGGGCGGTGC GTCCAATGAG
TCCATTCAGC TGCAATGCCT GCGCACTTCC GACGTCGAGG CCTTGCGCGC CGAGCTGTTC
CGCCGCAAGA AGGTGCTGCT GGACGGCGGC TCCATCGACG AGTGGGGCTC GGCCATGTTG
GGCGGCGTGC AGTACCCGTC GACCTGGGCG CTCGCGTCCT ACGGAATTAA CCCCGCTACC
TACGTGCAGC CTGCGATTCC GCAAGGCGCT GTTTCGAACC AATCGGCATC GTCCCAGGTC
CAAGCGGCGC AAGAGGGCAA TGCACTCTCC GGCGCAGCGG ATTTTTCCGA CCACTTCCGC
GGCGTTTTCG GTGGGGAAAA GGTCGACACG GGCCAGGTGT CCTACGAGGT GCGCCTGAGC
AACAAGGAGC TGTTCCTGGC GGGCATCTCC GGCTCCGGCG GCACCATGGG TCTGGTGGTT
GCGGCGATTG CCGGTTTGGC AGGCGCCGTC ATGGATGCGC TCGAGGATGT TTTCATAGTG
CACCTCGATA CGGCCGCGCG CGTTGCGGCC AGCACCTTCG ATGTGGGCTC AGCCGTTGCG
TTGGTGGCGG TGGTCCTGGT CGTTTTGCTT GTCATGTGGG TGATGTCGGC CCTCGGCACC
ATGGTGAACT ACGGCGGATT TGCACTGCGC CGTCGCGGAA CGCGTATCGA GGTTGAATCG
GGCCTGCTCA GCCGTAAGTT CCAGGGCATC GACGTGGACC GCATCCAATC GGTTGAAATT
CACGAAGCTC CTATCCGCCG TCTGTTCGGC TACTGCGAGC TGCGCGTGAC GAAAATCGAC
GCCATCTTGC CCGGCACCGA CTCCAGGTCG CTTAAAAACA CCCAGCTCGG CGCCGTTCTG
CACCCCTTTG TGAAGACCAG CCGCGTGCCT GAAATCCTGC GCGGTGTGCT TCCCGAGTTC
GCCGAATACC CGCAGGCGAC GCAAACTTTG CCGCCCGTGG CGCTGCGCCG GGGCATCGTG
GGACACGGCC TGGTGCGCAA CTTCGGATTC TGGTCTGCCA TTGTGCTGTT GCTGGCGTAT
GCGTTTGCCC GATTGGCCGT ATCTCCGAAC ATGGCGGGCT TCCTGTCCGG TGCGCTTGTC
GTGCTCTTGG CCGTATGCGT GCTGATCATG GTGATTGGCG CCGTGGGCGG GCTGCTGTGG
TTCCGCGGGT CGGCGCTTGG ATACAACCGC GACTATATGA CCATGGTCGT CTCAGGGTAT
ACCCGTCGCA TCATAGTCAC GCCGCGCAAG AAGATTCAAT TTGCAACGCT GCTCGCCAAT
CCGTTCCAAC GTCGCGCGAA GGTGGCTTCC GTATGCGCCC GCACGGCGGC GGGCATCGAC
GGTACCACCG AAACGCTGTG GGATATGGCA CTTGACCAGG CCGAAGCTTG GCAGGAATGG
GTCCGTCCCC GCAAACGCGC CCAGCACGCT CAGCAGGCTT AG
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| Protein sequence | MDTPQFNNQQ NGPQMPPAGW PQSQVQPTGQ ARVQPQLPQQ PAAPQPQVQP QPQAPQPVDY
RETVPEPLRP GMHQVHHAFI WIKGIGSAVG IVFAMAITAF GNLMSAGLGE LGAFIVFLIL
GLTILVTVGL VFLFRWISWK YLSYALTPTE IEVHSGWLNK KRVHVPYQRI QSVNQTATPL
QRVVGICDVS VDTAGGASNE SIQLQCLRTS DVEALRAELF RRKKVLLDGG SIDEWGSAML
GGVQYPSTWA LASYGINPAT YVQPAIPQGA VSNQSASSQV QAAQEGNALS GAADFSDHFR
GVFGGEKVDT GQVSYEVRLS NKELFLAGIS GSGGTMGLVV AAIAGLAGAV MDALEDVFIV
HLDTAARVAA STFDVGSAVA LVAVVLVVLL VMWVMSALGT MVNYGGFALR RRGTRIEVES
GLLSRKFQGI DVDRIQSVEI HEAPIRRLFG YCELRVTKID AILPGTDSRS LKNTQLGAVL
HPFVKTSRVP EILRGVLPEF AEYPQATQTL PPVALRRGIV GHGLVRNFGF WSAIVLLLAY
AFARLAVSPN MAGFLSGALV VLLAVCVLIM VIGAVGGLLW FRGSALGYNR DYMTMVVSGY
TRRIIVTPRK KIQFATLLAN PFQRRAKVAS VCARTAAGID GTTETLWDMA LDQAEAWQEW
VRPRKRAQHA QQA
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