Gene Apre_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1757 
Symbol 
ID8368672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013164 
Strand
Start bp16930 
End bp18546 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content23% 
IMG OID644984688 
ProductABC transporter related 
Protein accessionYP_003142339 
Protein GI256821140 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0110812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATAA AATTCAATGA TAAACAAATG AATTTGAAAA GTAGAGAAAT AGTTGCCTTA 
ATTGTCTCTA CTTGCATATT CATCTTATCT AATATTTTAG CAATATATGT TCCTAGCATT
TTAGGTAAAA TTATAGACAT AATTACATCA ACCAATAAAT CTAATAGTGT AAGAGACTAT
GTATTTATAT TTGCTATAAT TTCTTTGCTA ATAATATTAT TACAATATAT ATCTTCAAAA
ATATTAAATG AATTAAATAA GAAGATTAAT ATTAGAATGT GTACATATGT GTTTAGCAAA
ATAAGAAAAA TGAATCTTAT ATATTGGTTT AAAGAATCTA AAGGCGAAAT CATAACAATT
ATTAGTAATG ATATATATAA TATTACTGAT TTCATAACAA ATTCTATACC TAACTTATTT
AGTTTAATAA TATCAACTAT ACTGATTTTT ATATACATAA TGAGATCTAG TTTGTGGATA
GCATTTATAA TTTTTTTACT AAATATTGTA TTGGTAGTAA TACAATATAT GATGTCTAGA
GTCGTTAAAA TCAAATCTAG AGATGTAAGA AATTTAAATG CAGAAGTAAA TTCAAAAGTA
CAAGCTTGTA TAAATAATGT AGAAAATTTA CTTCTTAAAG ATTATTTGAA AAGCTCTAGC
GAAAATTATA ATAGAAGTAA TAAAAAGTTA TTCATTGCAA ATAACAATTT AATGGATTTG
ATTTTAAGAT CGTCTACTTT AAATCTTTTG GCAAGTTTGT GTAGTATTTT TATTATTATA
GCGATTGGGG GACACTTAGC AAATACTGGA AATATTTCGA CTGGAAGACT AGTAACTTTA
ATTTTATACT CTCAAAAGAT TTTTTCACCT ATAACTAACA TAACAAAAAT ACTTATGAAA
TTTAATACGA TTTTACCAAA GAAAACAAAA ATAGATCAAT TATTAGATAA TCAAGATATG
ATTGAAGATT TTACTAACTT TGACCAATTA TTGGAGCATA AATTAAACTT TAAAACAATT
ATTGCTAATG ATTTAGAGAC CGGATATTTA GATGATAATA TTAAAATAGA GAATTTAAGT
ATCGATTTTA CAAAAAGTAA TGTCATTGGT ATTATAGGTG ATAACGGAGT TGGTAAAACC
ACTATTATAA AGTTAATAAG AAAGCTTTTA CCTATAAAAA AAGGAAAAAT AAAAATAGAT
AATACTCCAC TTGAAGATAT TGGTATTGGT GAATTAAGTC GAAATATCCA AATTATGCCT
CAGACTGATT CTTTAAATCA ATACGATATT AAATATATAA AATCCAAGTT ACAAGAACAT
TATTTAAATG TAGATATAGA GATGTTTATA GGTGATATTT CAAAAATTTT TAAATCGTCA
GATAAGTATG AATATAATAT AAATTCAAAA GGAGAATTGC AAAAATTGTC ATTTTTAAAT
ACAATTTTTA AAGATGCAAA ACTATATATT TTAGATGAGC CTTCAGCATC CATTGATTTA
AAAAGTGAAA AGTATATGTC TAAGATTATT AAAGCATTAT CTAAAGATAA AAAATTTATC
ATTATTACAC ATAGACCAGA GTTGTTAAAT ATATGTGATT ATATAATTAA CTTGTGA
 
Protein sequence
MFIKFNDKQM NLKSREIVAL IVSTCIFILS NILAIYVPSI LGKIIDIITS TNKSNSVRDY 
VFIFAIISLL IILLQYISSK ILNELNKKIN IRMCTYVFSK IRKMNLIYWF KESKGEIITI
ISNDIYNITD FITNSIPNLF SLIISTILIF IYIMRSSLWI AFIIFLLNIV LVVIQYMMSR
VVKIKSRDVR NLNAEVNSKV QACINNVENL LLKDYLKSSS ENYNRSNKKL FIANNNLMDL
ILRSSTLNLL ASLCSIFIII AIGGHLANTG NISTGRLVTL ILYSQKIFSP ITNITKILMK
FNTILPKKTK IDQLLDNQDM IEDFTNFDQL LEHKLNFKTI IANDLETGYL DDNIKIENLS
IDFTKSNVIG IIGDNGVGKT TIIKLIRKLL PIKKGKIKID NTPLEDIGIG ELSRNIQIMP
QTDSLNQYDI KYIKSKLQEH YLNVDIEMFI GDISKIFKSS DKYEYNINSK GELQKLSFLN
TIFKDAKLYI LDEPSASIDL KSEKYMSKII KALSKDKKFI IITHRPELLN ICDYIINL