Gene Coch_2171 details

Gene Information

• Locus tag: Coch_2171
• Symbol: recR
• ID: 8368632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2587320
• End bp: 2587940
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644984625
• Product: recombination protein RecR
• Protein accession: YP_003142276
• Protein GI: 256820997
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTCT CATCTAAACT CTTAGAAAAC GCCGTCTACG AAATAGCACA ATTGCCTAGT 
ATAGGCAAAC GTACGGCTTT GCGTTTAGCC TTGCACCTGC TCAAACAACC CGAGGAGCAA 
TCACTACAAT TGGCACAAGC TATTGTAGCT TTACGCACTC ATATCCAATA CTGCAAAAAC 
TGCCACAACA TCTCCGATGT AGATTTGTGT GAGATATGTG CTAACCCTAT GCGTGATACG 
GGAGTTGTTT GTGTTGTAGA AGATTTTAGA GATGTAATGG CAATAGAAAA CACAGGACAA 
TTCTTTGGTC AGTATCACGT CTTAGGAGGT AAAATATCCC CTATCGATGG CATCGCTCCT 
TCCAATCTAC ATATTGCCTC ACTGATAGAA AAAGTAAAGA CAGGTAAAGT AACTGAACTA 
ATCCTAGCTC TGAGCAATAC AATGGAGGGC GATACTACCA ATTTCTATAT TTACAAACAA 
GTAGAGTCTT ACCATATCAC CATTTCTACC ATTGCCCGAG GCATAGCCGT AGGAGGCGAA 
CTCGAATACA CTGATGAGGT AACTTTGGGC AGAAGTATTA CTCAGCGCAT TCCTTTTGAA 
AAAGCTATTA AAGCCGTTTA A 

 

Protein sequence

MDFSSKLLEN AVYEIAQLPS IGKRTALRLA LHLLKQPEEQ SLQLAQAIVA LRTHIQYCKN 
CHNISDVDLC EICANPMRDT GVVCVVEDFR DVMAIENTGQ FFGQYHVLGG KISPIDGIAP 
SNLHIASLIE KVKTGKVTEL ILALSNTMEG DTTNFYIYKQ VESYHITIST IARGIAVGGE 
LEYTDEVTLG RSITQRIPFE KAIKAV