Gene Coch_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2165 
Symbol 
ID8368626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2582541 
End bp2583308 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content41% 
IMG OID644984619 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003142270 
Protein GI256820991 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT CTTTTTATCA AAAAGAAGGA AAAAGAAAGA ATAAGACAGT TGTCTTCCTT 
CACGGCTTTT TAGAAGACCA TACTATATGG CAACCTATCA GTAAAGCTCT CTCTACCGAA
TATTTCACAC TATCCATCGA CCTTTTAGGG CACGGGCAGA GCCCCACTAT CGCCCCAGTA
CACACAATGG AAATGATGGC AAGCCAAGTA AACGATATCT TACTAAAAGA AGAAATAGAA
CATTGCACCA TCGTGGGGCA CTCAATGGGA GGTTATGTAG CCTTAGCTTT TGCTGAATTA
TTCCTCAAAA AAGTAGAAGG AATAGTATTG TTAAACTCCA CTACCCTACC CGATTCTCCA
GAGAAAAAAG TAAATAGAGA CCGAGTGCTG AAAGTAATCG ATAAAGAGAA AGAACTCTTC
GTGCGCACTG CCGTTATAAA CCTATTTAGC GATGAAAACA AAACGCTGAT GAAACCGGCG
CTCAACAAAC TAATCGATAT AGCAATGCGC ACCCCTAACG AAGGTATCAA AGCAGCTTCC
TTAGGAATGA AACAACGCCC CGACCGCACA GAACTATTCG AACAACTAAC CGCTAAAAAG
CATATCATTA TGGGTAAAAA AGACGCTCTT ATCCCTTCTG ATAGTTTGAT AGCATTAGCC
CAAAAAGCAG GTGCAAGCTA TACCTTGCTT TCAGGCGGAC ATTTAGTATA TATTGAGAAC
GAAGCCGAGA CCATAGAAGC CTTGCGCAAT TTTATGGCAC AACCCTAA
 
Protein sequence
MKQSFYQKEG KRKNKTVVFL HGFLEDHTIW QPISKALSTE YFTLSIDLLG HGQSPTIAPV 
HTMEMMASQV NDILLKEEIE HCTIVGHSMG GYVALAFAEL FLKKVEGIVL LNSTTLPDSP
EKKVNRDRVL KVIDKEKELF VRTAVINLFS DENKTLMKPA LNKLIDIAMR TPNEGIKAAS
LGMKQRPDRT ELFEQLTAKK HIIMGKKDAL IPSDSLIALA QKAGASYTLL SGGHLVYIEN
EAETIEALRN FMAQP