Gene Coch_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2161 
Symbol 
ID8368622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2579069 
End bp2579944 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content40% 
IMG OID644984615 
ProductAbortive infection protein 
Protein accessionYP_003142266 
Protein GI256820987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.646746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTTA AAAACGGAAG ATTATCACAG AGCCCTAAGT GGCTTTATAT TATAGTTCCA 
ACCCTGTTCT TTGCCTTTAC AGGGTTGAAC TTTTTAGTAG CACAGTTTTT TGATACTACT
ACACTTATAC AGTCGGAAAT TGCCCAAAAA GGAGAATTAC AATTCTTGTT TGAGAACTTA
GTTATCTTTG CTATCTTCTT AGGGTTATTG TTACTATGGG TGAAGTTCAT ACATCGCCAG
CCTTTGGTAG CACTTATCAC GGCGCGACCC CGTATCAGTT GGAAGCGTTT TTGGTTTGCT
TTCTTATTGT GGGGAGGCGT AACCATAGGC ATAACTTGTA TCGACTACTT ATTTTTTAAC
CCCGATGATT ATATTTGGAA TTTTCAGTGG ATACCTTTCT TAAAACTACT CGTGATAGTA
GTGCTGTTCA TTCCTCTGCA AACCGCTTTT GAAGAAATAT TCTTTCGAGG CTACCTAATG
CAAGGCTTAG GACTTGCTAT GCGTAATGCG TGGTTTCCTT TGCTTTTTAC CTCTATCACC
TTCGGACTAA TGCACATTGC CAACCCCGAG GTAGAAAAAT TAGGATACAG CTTGCTTATC
TATTACATAG GTACAGGTTT GTTCTTAGGT ATCACTACCT TAATGGACGA TGGCTTAGAG
TTAGCTTTAG GGTTTCACAC CGCCAACAAC CTTTTTACAG CTCTTTTAGT AACTTCCGAC
TGGACAGTTT TCCAAGTTCC TTCCGTCTTG CGTGATGTCT CAGAACCCTC TTTAGGCTTC
AGTGTATGGG CTCCTCTATT GCTCTGCTTC CCTCTTTTAT TGTATATCTA CGCCAAGAAA
TACCATTGGA AAGAGTGGAA AAAACACTTG TTATAA
 
Protein sequence
MYLKNGRLSQ SPKWLYIIVP TLFFAFTGLN FLVAQFFDTT TLIQSEIAQK GELQFLFENL 
VIFAIFLGLL LLWVKFIHRQ PLVALITARP RISWKRFWFA FLLWGGVTIG ITCIDYLFFN
PDDYIWNFQW IPFLKLLVIV VLFIPLQTAF EEIFFRGYLM QGLGLAMRNA WFPLLFTSIT
FGLMHIANPE VEKLGYSLLI YYIGTGLFLG ITTLMDDGLE LALGFHTANN LFTALLVTSD
WTVFQVPSVL RDVSEPSLGF SVWAPLLLCF PLLLYIYAKK YHWKEWKKHL L