| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2127 |
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| Symbol | |
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| ID | 8368588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2545649 |
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| End bp | 2546068 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984581 |
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| Product | protein of unknown function UPF0054 |
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| Protein accession | YP_003142232 |
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| Protein GI | 256820953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000283027 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTCTT TTTTTAACGA AACTCCCTTT GTCTTTCCTT TTAAGAAAAA CGAAGTAAAA
CGTTGGGTGA AACGCGTAGC CCAATCCGAA GGTAAAGAGG TGGGCAATAT CAACTATATT
TTTTGCGATG ATGAGTATTT GCACAAAATA AATGTAGAGT ACTTGCAACA CGACACCCTT
ACCGATATCA TCACCTTTGA TTATTCTGAG GGCAAAGTGC TCCATTCGGA TATTTATATT
TCGGTAGAAC GTGTAAAGGA GAATGCTAAC ATCTTTAAAG TGCCGTTCCA AAGAGAACTC
CTGCGGGTAT TGGCACACGG CTTGTTACAC CTCTGCGGTT ATAAGGATAA AACACCGGAA
GACAGTGCGC TAATGCGCAA CAAAGAAGAA GAAAAGATGA ACCTTTTTAC GGTTGTTTAG
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| Protein sequence | MTSFFNETPF VFPFKKNEVK RWVKRVAQSE GKEVGNINYI FCDDEYLHKI NVEYLQHDTL
TDIITFDYSE GKVLHSDIYI SVERVKENAN IFKVPFQREL LRVLAHGLLH LCGYKDKTPE
DSALMRNKEE EKMNLFTVV
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