Gene Coch_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2121 
Symbolupp 
ID8368582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp2540788 
End bp2541441 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content41% 
IMG OID644984575 
Producturacil phosphoribosyltransferase 
Protein accessionYP_003142226 
Protein GI256820947 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000112291 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATAC ATCATTTAGG CGAAGAGCCT TCCGTATTAA ACCGATTTAT CGCCCAGTTG 
CGTGATGTAA ATATTCAAGC AGACCGTATG CGATTCCGTA AAAATTTGGA ACGAATAGGG 
GAGGTGTTGT GTTACGAGAT GAGTAAGTTT CTACACTATA AAACGGAAAC AATTACTACA 
CCTTTGGGCG AAAAGAAGGT ACAACTTCCG AAAGACGAGA TAGTAATTTG CTCTATTTTG 
CGTGCTGGTT TGGCATTGCA TCAAGGCTTG ATGAACTACT TTGATAATGC TGATAATGCG 
TTTATCTCGG CTTATCGCAA ACACACTTCC GAGACTGATT TCGATATAAT GGTGGAGTAT 
CTGGCTTCGC CGTCCTTAGA AGGTAAAATC TTATTCTTAG CTGACCCAAT GCTGGCTACA 
GGGCGTTCGT TTGCTAATGT ATTCAATGCG CTGAAACCTT TAGGAACACC TAAAGAGATA 
CATTTATTTG CTGTTATAGG GGCACAGCAG GGGATAGAAT ACTTGGAAGA TAAGTTTCCT 
GAGACTACTC ATTTATGGAT TGCTACCATA GATGCTCACC TTAACGACCA CGGCTATATA 
GTACCAGGTT TAGGTGATGC GGGTGATTTA GCTTTTGGTA ATAAAATGGA GTAG
 
Protein sequence
MIIHHLGEEP SVLNRFIAQL RDVNIQADRM RFRKNLERIG EVLCYEMSKF LHYKTETITT 
PLGEKKVQLP KDEIVICSIL RAGLALHQGL MNYFDNADNA FISAYRKHTS ETDFDIMVEY 
LASPSLEGKI LFLADPMLAT GRSFANVFNA LKPLGTPKEI HLFAVIGAQQ GIEYLEDKFP 
ETTHLWIATI DAHLNDHGYI VPGLGDAGDL AFGNKME