| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2113 |
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| Symbol | |
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| ID | 8368574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2532946 |
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| End bp | 2533896 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984567 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003142218 |
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| Protein GI | 256820939 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.202192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAT CCAGAGAAAT AAAAACAGCT ATTATAGTTG TGGCGGGTAT TGCCGCTTTT
TATATAGGCT TTAACTTCTT GAAGTCTAAA TCATTATTTA ATAAAACGAA TACTTATTAC
GCTTATTTTC CTCATTCAGG AGGGTTAAAA ACAGGTACAC AAATCACTGT AAATGGGGTG
AAAGTAGGGA GTGTGGAAGC AGTGGACTTA GAAGAGAAAA GTGCCAAGAT AAAAATCACG
ATGGAGTGTT CAGACGATTT TAAGTTCTCT AAGAATAGTG TAGCCGAGCT TTACAACAGT
TTGCTTGGAG GTGCAGGACT GCAAATTATT CCCGCCTTCG ATAATGCTCC TATAGCCGTA
TCGGGAGATG TATTAGAAGC ACGTGTACAA GAAGATATGC TCGCCTCTAT CTCTTCGTCA
ATCAAACCTA CACAAGACAA ACTCAATCGC CTTTTAGGAC AAGCCGATAC CACTCTTACA
GGAGTGAACA GTGTTTTAGA TGCTAAAACT ACTAACAATT TAAAAATTGC CATTGCCGAA
CTGAGCGCGA CAATGCACAA CCTAAATCAG GCATCAGTAA ACCTCAATAA GATGTTGGTA
GCTAATCAAG CCAATTTGAA TGCTACTTTA AGTAATGCTA ATAAAATCAC TACTGATCTA
TCAAAAGTAT CAGGACAGCT TTCGGAAGCT GAACTCAATA AAGTAATTGC CAATGCACAA
ACAACTCTTA ACAACCTCAA TACTCTTTTG GCTGAAGTAG AAGGAGGCAA GGGTACTATT
GGAAAATTAC TAAAAGACGA AACGCTCTAT AAAGATTTAG ACAAATCGGC TAAACAGCTC
GAATTGCTCT TGCAAGACCT TCGTTTAAAT CCTAAGCGTT ATCTTCATTT CTCCGTTTTT
GGTAAAAAAG CTAAAACATA CGAGCCTCAA GACGAAGAAA AAGGAGAATA A
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| Protein sequence | MKLSREIKTA IIVVAGIAAF YIGFNFLKSK SLFNKTNTYY AYFPHSGGLK TGTQITVNGV
KVGSVEAVDL EEKSAKIKIT MECSDDFKFS KNSVAELYNS LLGGAGLQII PAFDNAPIAV
SGDVLEARVQ EDMLASISSS IKPTQDKLNR LLGQADTTLT GVNSVLDAKT TNNLKIAIAE
LSATMHNLNQ ASVNLNKMLV ANQANLNATL SNANKITTDL SKVSGQLSEA ELNKVIANAQ
TTLNNLNTLL AEVEGGKGTI GKLLKDETLY KDLDKSAKQL ELLLQDLRLN PKRYLHFSVF
GKKAKTYEPQ DEEKGE
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