Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2072 |
Symbol | |
ID | 8368533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2485114 |
End bp | 2486238 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644984526 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003142177 |
Protein GI | 256820898 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAG CCATAGTGTG TTACCCTACC TTTGGGGGGA GTGGTGTTGT AGCTACCGAA CTCGGGCTTG CCTTAGCTCG CAAAGGTCAT CAGGTGCACT TTATTACGTA TAGTTACCCC GTGCGTTTAG ACTTCTTGGA GATGAACATT CACTTTCACG AAGTGCACGT AGAAGAATAC CCCTTGTTTC ACTACCAGCC TTACGAACTA GCATTGTCCA GCAAAATGGC TTATGTGATA AAAACCTATC ACATAGATAT TTTGCACGTG CATTATGCCA TTCCGCACGC TTATGCAGGT TATATGGCTA AACAAATGCT CAAACGGGAA GGGATAGAAG TACCTATGGT AACGACCCTT CACGGCACCG ATATTACCCT TGTGGGCAAC CACCCTACTT ACAAAGAGGC AGTAACGTTT AGCATTAACG AATCGGATAT TGTAACTTCA GTGTCCGAGA GTTTAAAGCA AGATACTCTA AGACTTTTCC GTATAGATAA AGATATTAAG GTAATTCCTA ACTTCACAAA TATAAAAAAA TCCAAAGAAA CTTCTCCTTG CAAACGTACT GTAATGGCAA ATCCTGAGGA ACTCATCGTT ACACACATTA GTAATTTTAG GAAGGTAAAA CGCATAGACG ATGTGGTGAG AATTTTTTAT GGCATTCAGC AGAAACTTCC TGCTAAGCTC ATAATGGTAG GCGACGGACC TGAGCGCGAG ATAGCCGACC AGCTCTGCAA GGATTTAGGC ATCAAGAGCA AAGTGCTGTT TTTAGGTAAT ACTTCTGATA TAGACCGCAT TTTGTGTTTC ACCGATTTAT TCTTACTCCC TTCTGCCTCT GAGAGCTTTG GACTTTCGGC ATTAGAAGCA ATGGCAGCAG GCGTTCCGGT AGTATCGAGC AATACGGGAG GACTTCCAGA AGTGAATGAA GAGGGCGTAT CGGGCTATCT GTGCCCCATA GGCGATGTAA AAGCAATGGC TGAGAAGGCT ATTTACATAC TTGAAGACAA AACCCGATTG GCACAATTTA AACAGAATGC CCGAAAAGTA GCCGAACGTT TTGACGAGGA TAGAATAGTG CCAATGTATG AAGCACTTTA CTACAGTGCT ATCGACAATA AATAG
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Protein sequence | MNIAIVCYPT FGGSGVVATE LGLALARKGH QVHFITYSYP VRLDFLEMNI HFHEVHVEEY PLFHYQPYEL ALSSKMAYVI KTYHIDILHV HYAIPHAYAG YMAKQMLKRE GIEVPMVTTL HGTDITLVGN HPTYKEAVTF SINESDIVTS VSESLKQDTL RLFRIDKDIK VIPNFTNIKK SKETSPCKRT VMANPEELIV THISNFRKVK RIDDVVRIFY GIQQKLPAKL IMVGDGPERE IADQLCKDLG IKSKVLFLGN TSDIDRILCF TDLFLLPSAS ESFGLSALEA MAAGVPVVSS NTGGLPEVNE EGVSGYLCPI GDVKAMAEKA IYILEDKTRL AQFKQNARKV AERFDEDRIV PMYEALYYSA IDNK
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