| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2061 |
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| Symbol | |
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| ID | 8368522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2468770 |
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| End bp | 2470356 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644984515 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003142166 |
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| Protein GI | 256820887 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000559394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACATA TGAAAGTTTT AAAATATATA ACAATTATCG CAGGACTATT GTTTACAGTC
TCTTGTAATG ATTTAGACCT TGTTCCAAAG GACTATAACG GTAGTGGTAA CTTCTGGAAA
AATGAAGCCC AAATAGTAGG GGCTATCGAG GGAGTACATA ACCAATTTAG AAGCAATGAT
TTTAACTATT GGATAATGGG TGAAGCACGT GGAGGTACTA TGGTGCCCGG TGGTACATCA
TCATTAGAGC AGAATATATA TTATTCGGAT ATAAAAATAC AGAACTTTTC TGCTCAAAAT
CCTAACAATA GTTCTTGGTT TGACTTTTAT GGAAAGATTT TTAATATTAA CAATGCTATT
AAGAATATTC TAGAAGCCAA TTATTTAACT GAAACCAATA AGAATTATTA TTTAGGGCAA
ATGTATGGAA TGCGTGCGTG GTACTATTTT TGGCTTTACA GAACCTATGG GGGTGTACCC
ATTAAAACTG GAACTGAAAT ATTAGACAAG ACACCTAGTA GTGGTAAAGA ATTATTTACG
CCTCGCAGTA CTCCAAAAGC TACTTTAGAT TTCATAAAGA CCGATATTAA TAACTCTGAA
AAATATTTTA CAGATTCTAA CAGAGTGAAT AATTTTGATA GAATACATTG GTCATATTAT
GCCACCTTAA TGCTGAAAGC TGAGATTTAT CTTTGGTCAG CCAAAGTCAC TACCGGTGAC
CAAGTTCCTT CTGCATCTGA TTTAGACACT GCAAAAGAAG CATTAGACAA GGTAGCTAGT
TCAGGTAAAT TTAGCCTTTT GCCTAACTAT GCTGATGTAT TTGCTTACAA TAAAAAGCAA
AATAATGAGA TTATATTTGC AATGGCTTTT TTAGAAAATG AAGCAAGTAC TCCGTTCAAC
TCATTTATGT ATTACCCGCC CAATTTTATC AATAAATACG ATGAAACTGG GAAAGCTTTT
CCTAATAACG ACCCCTTGAA GATTCAGTCA GGGTTCTTAT TCAATGAGTA TAAATTTGAA
TTGTTTCAGG CTTTTGATGC TACTGATACC CGTAGAGCTA CTACATTCCT ATCGTTCTAC
TCTAATGCAG CTAAAACACA AGGGAGAGGG ATAGCTCTCA TCAAATATAT AGGCTTTATA
AACTCAGCGA ACACTCGTGT TTTCTCTGAT GATATACCTG TATACCGCTA TGCCGATGTA
CTGTTGATGT ATGCTGAGAT AGCTAATAAG CAAGGCTCTG ACCCCTCTAC TTATATCAAC
CAAATTAGAC AGAGGGCTTA TGGTTCAAAT TATACTTCAG CTAATGCGTA TACACATACT
AACTTTGCTG ATGGTGAGTT AGCTATCTTG AAAGAACGTG ATAAAGAGTT TGTAGCCGAA
TCTAAACGCT GGTTTGATGT TCGCCGTCTA CAAGATGCCT CTGGTAAACC TCTTGTATTT
TCAAAAGAGG CAAGTTATGG TACAGTGGCA GGCAATGTAG AGCCTATACT GAACCAAAAT
ACAGAAGCAC ATAAGCTACT TTGGCCTATC AATTCTGATA TTATCAGCAG AGATACACTC
GTTACTCAAA CCCCTGGTTA CAAATAA
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| Protein sequence | MQHMKVLKYI TIIAGLLFTV SCNDLDLVPK DYNGSGNFWK NEAQIVGAIE GVHNQFRSND
FNYWIMGEAR GGTMVPGGTS SLEQNIYYSD IKIQNFSAQN PNNSSWFDFY GKIFNINNAI
KNILEANYLT ETNKNYYLGQ MYGMRAWYYF WLYRTYGGVP IKTGTEILDK TPSSGKELFT
PRSTPKATLD FIKTDINNSE KYFTDSNRVN NFDRIHWSYY ATLMLKAEIY LWSAKVTTGD
QVPSASDLDT AKEALDKVAS SGKFSLLPNY ADVFAYNKKQ NNEIIFAMAF LENEASTPFN
SFMYYPPNFI NKYDETGKAF PNNDPLKIQS GFLFNEYKFE LFQAFDATDT RRATTFLSFY
SNAAKTQGRG IALIKYIGFI NSANTRVFSD DIPVYRYADV LLMYAEIANK QGSDPSTYIN
QIRQRAYGSN YTSANAYTHT NFADGELAIL KERDKEFVAE SKRWFDVRRL QDASGKPLVF
SKEASYGTVA GNVEPILNQN TEAHKLLWPI NSDIISRDTL VTQTPGYK
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