| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2022 |
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| Symbol | cysS |
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| ID | 8368483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2417510 |
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| End bp | 2418988 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984476 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_003142127 |
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| Protein GI | 256820848 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.837367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACATC AATTAAAAAT ATTTAATTCC TTAACAGGAG AAAAAGAAGT GTTTGTACCC
TTACACGAAA ACAATGTAGG AATGTACGTA TGTGGCCCTA CTGTATACAG CAATGTGCAT
TTAGGCAATG TGCGCACCTT TATGTCGTTT GATTTTGTGT ATCGTACGCT TAAATTCTTA
GGTTACAAAG TGCGCTATGT ACGCAATATC ACCGATGCAG GTCACCTTAC AGATGATGGT
GATGTGAACA ACGACCGCTT TGTAAAACAA TCACGTCTCG AAAAACTCGA ACCTATGGAA
ATTGTACAGA AATACACTGT AGATTTCCAC AAAGTATTAG AGATATTTAA TTTACTACCT
CCTACTATTG AGCCTACCGC TACAGGGCAT ATATTGGAGC AAATACAGCT TACCGAAAAA
CTCTTAAAAG ACGGATTTGC TTATGAAAGC AATGGTTCTG TGTACTTCGA TGTACTTGAA
TACAACAAAC GCGGACTCAA TTATGGGGAG CTCTCTCGAC GCAATATAGA AGAGCTCTTT
GCCAATACTC GTGATTTAGA TGGGCAAGGC GAAAAACGCA ATCCTCAGGA CTTTGCGCTC
TGGAAGAAAG CCTCTCCTGC CCACATTATG CGTTGGGCAT CACCTTGGGG CGACGGCTTC
CCAGGTTGGC ACTTAGAATG TACGGTGATG AGTACCAAAT ACCTCGGTAA CCAATTTGAT
ATTCACGGAG GCGGTATGGA CTTAAAGTTC CCGCACCACG AATGCGAAAT TGCACAAGGT
AAAGCAGGTC ACGGCGAAAG TCCCGTACGC TACTGGATGC ACGCCAATAT GCTCACAATG
AATGGGCAAC GTATGAGTAA ATCTACTGGT AACTATATAT TACCTATGGA ACTCATCAGC
GGAGAGAATA CTTTTTTTGA GAAACCTTTT GCTCCTGCTG TTATTCGCTT TTGCTTTATG
CAAGCACACT ACCGTAGTGT ACTTGACATT TCTAACGAAG CAATGCTCGC TGCTGAAAAA
GGCTTTAATA GACTTATGGA AGCGATAAAG ATATTGAATG AACTTACTAC TGATACAGAG
CTCCCAACTT CGCTCCCTAT AGCCGAATGG AAACAAAAAT GCTATGATGC ACTGTTAGAC
GATTTCAATT CACCTATACT CATAGCCCAT CTCTTTGAAG CTGTAAAGTG GATATTTCAA
GTAAAAAACG ATGAAGAGAG AATTTCGGTA ACAGAGCTCA AGGAGTTGAA AGAACTGATG
AATGCTTTTG TTTTTGATGT ATTGGGGTTA CAAAGTGAGC AACAAACGGT TAATAACAAT
GACAAACTCG ACGGCGTGCT CCAGTTGCTT ATTAATATGC GAATGGAAGC TCGTGCCAAT
AAAGACTGGG TGCTTTCTGA TAAAATTCGT GATGAACTCC TTGCATTGGG TATTCAGCTC
AAAGACGGTA AGGAGGGAAC GAGTTATAGT ATAAATTAA
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| Protein sequence | MEHQLKIFNS LTGEKEVFVP LHENNVGMYV CGPTVYSNVH LGNVRTFMSF DFVYRTLKFL
GYKVRYVRNI TDAGHLTDDG DVNNDRFVKQ SRLEKLEPME IVQKYTVDFH KVLEIFNLLP
PTIEPTATGH ILEQIQLTEK LLKDGFAYES NGSVYFDVLE YNKRGLNYGE LSRRNIEELF
ANTRDLDGQG EKRNPQDFAL WKKASPAHIM RWASPWGDGF PGWHLECTVM STKYLGNQFD
IHGGGMDLKF PHHECEIAQG KAGHGESPVR YWMHANMLTM NGQRMSKSTG NYILPMELIS
GENTFFEKPF APAVIRFCFM QAHYRSVLDI SNEAMLAAEK GFNRLMEAIK ILNELTTDTE
LPTSLPIAEW KQKCYDALLD DFNSPILIAH LFEAVKWIFQ VKNDEERISV TELKELKELM
NAFVFDVLGL QSEQQTVNNN DKLDGVLQLL INMRMEARAN KDWVLSDKIR DELLALGIQL
KDGKEGTSYS IN
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