| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2001 |
|---|
| Symbol | |
|---|
| ID | 8368462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2394818 |
|---|
| End bp | 2395438 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644984455 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_003142106 |
|---|
| Protein GI | 256820827 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGT TTATAAAACT ATATAATGAA AATCCCAATG AAAAAGATAT AAATAGGGTA
GTAGAAGTCC TTCGCCGTGG AGGATTGATT ATTTATCCTA CCGACACAGT TTACGGATTG
GGCTGTGATA TTACTAACAC TAAAGCTCTT GAAAAGATTG CTCGTATCAA AGGGGTAAAG
CTCGAAAAAG CAAACTTCTC TTTTGTGTGT TCTGATTTAA AGAACCTATC AGATTACGTA
AAACAAATAG ATACAAGTAC TTTTAAGTTG TTGAAACGTA CGTTACCTGG TCCTTATACT
TTCATTATGC AAGGTAATAA TAATTTACCT AAAGATTTTA AGAAGAAAAA AACAGTGGGT
ATTCGTGTCC CCGATAATTT AATAGCTCGT ACAATTGTAG AGAAATTAGG GAACCCTATT
GTATCTACCT CTATTTATGA TGAAGATGAT GTGATAGAAT ATACCACCGA TCCAGAACTT
ATTTTCGAGA AATGGCAAAA CAAAGTAGAT TTGGTGATTG ACGGCGGTTA TGGCGATAAT
GTAGCTTCCA CAGTTATAGA CCTTTCAGGA GATGCTCCGA AAGTATTACG TGAAGGCAAA
GGAGACATAT CAATTATTTG A
|
|---|
| Protein sequence | MAEFIKLYNE NPNEKDINRV VEVLRRGGLI IYPTDTVYGL GCDITNTKAL EKIARIKGVK
LEKANFSFVC SDLKNLSDYV KQIDTSTFKL LKRTLPGPYT FIMQGNNNLP KDFKKKKTVG
IRVPDNLIAR TIVEKLGNPI VSTSIYDEDD VIEYTTDPEL IFEKWQNKVD LVIDGGYGDN
VASTVIDLSG DAPKVLREGK GDISII
|
|---|
| |