Gene Coch_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1997 
Symbol 
ID8368458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2391264 
End bp2391821 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content40% 
IMG OID644984451 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_003142102 
Protein GI256820823 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.418492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTATT ACGGGTTTCC TGTAGTACTT CTTACTACTA CCGATAAAGA TGGAAACGCC 
GATGTAACGC CTATTTCAAG CACCTTTACT TTAGGTGTGA ATGCTGTGAT AGCGCTTGTA
AAACTAAACA AGGCTTATCA TAATGTGATG GAAGTGCCCG AGGTAGTTTT TAACCTCCCT
ACGGCAGCTA TGTGGGAAAA AGTAGAGGCA ATTGCCCCTT ATACCGCTCA AAACCCTGTG
CCCCCTCAAA AAATGGGTAA ATACACTTAT ACTGACGACA AGTTTAGTAT TGGAGGATTT
ACTCAATTAC CTTCAGAAAA AGTACGCCCT CCGCGTATTG CCGAATGTCC TATTCAGGCA
GAAGCTAAAG TGAAAAACGT GAATGACCGC GATGCTTATG TACTTGTAGA ATTGGAATTT
GTGCAAGTAC ACGCTGAAGA CCATTTGGTA ATGGAAGGTA ATAAAATCAA TCCACTAGAG
TGGGAACCAC TTATCTATAA TTTTAAACAT TATTACGGAT TGGGAGAACA CAAAGGTTTG
AATTTCAGTA TTAAGTAA
 
Protein sequence
MFYYGFPVVL LTTTDKDGNA DVTPISSTFT LGVNAVIALV KLNKAYHNVM EVPEVVFNLP 
TAAMWEKVEA IAPYTAQNPV PPQKMGKYTY TDDKFSIGGF TQLPSEKVRP PRIAECPIQA
EAKVKNVNDR DAYVLVELEF VQVHAEDHLV MEGNKINPLE WEPLIYNFKH YYGLGEHKGL
NFSIK