| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1981 |
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| Symbol | ksgA |
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| ID | 8368442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2375252 |
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| End bp | 2376025 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644984435 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_003142086 |
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| Protein GI | 256820807 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAG TAAAAGCAAA AAAGCATTTA GGGCAACATT TCTTAAAAGA TTTGAACATT
GCACAGAAAA TAGCTGATAC ATTATCGCTA AAAAACTATA AAAAAGTAGT AGAAATAGGA
GCTGGAATGG GCGTGCTTAC TCAGTTTTTG CTCAAAAAAG GTGTTGATGT GCACATAGTG
GAAATCGATA AGGAATCGGT AGATTATTTG GAGGCAAATT ATCCTGCATT AAGAGGAAAA
ATAATTGCCG ATGACTTTTT GAAATATGAT GTAGCGGGTT ATTTAGCCGA ACCATTTGCT
ATTATAGGTA ATTTCCCTTA TAATATCTCT ACTCAAATCG TTTTTAAACT ACTTGAACTG
CGAGAATATG TTTCTGAGTT TAGCGGAATG TTTCAGAAAG AGGTTGCCGA ACGTATATGC
GAGCACGAAG GCAGTAAAAC GTATGGAATT TTATCAGTTT TAGTACAGGC TTTTTATGAA
ACGAGCTACT TATTCACAGT TTCGGAGAGT GTTTTTAATC CTCCGCCCAA AGTAAAGAGT
GGTGTAATAC GATTAGTACG CAAAGCTCAC TTCCATTTAG ATTGTGATGA AAGATTATTC
TTTACCGTAG TGAAAACGGC TTTCAATCAA CGGCGAAAAA CCCTTCGCAA CAGCCTAAAA
CCACTACTTA CAGATGAGAA TTTAAAACAA GACCCTATAT TTGATAAACG TCCTGAGCAA
TTGCCTTGGC AAGAGTTTGT TTTTATTACT AAAAAAATCA GTAATCAAGT TTGA
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| Protein sequence | MELVKAKKHL GQHFLKDLNI AQKIADTLSL KNYKKVVEIG AGMGVLTQFL LKKGVDVHIV
EIDKESVDYL EANYPALRGK IIADDFLKYD VAGYLAEPFA IIGNFPYNIS TQIVFKLLEL
REYVSEFSGM FQKEVAERIC EHEGSKTYGI LSVLVQAFYE TSYLFTVSES VFNPPPKVKS
GVIRLVRKAH FHLDCDERLF FTVVKTAFNQ RRKTLRNSLK PLLTDENLKQ DPIFDKRPEQ
LPWQEFVFIT KKISNQV
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