| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1976 |
|---|
| Symbol | |
|---|
| ID | 8368437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 2370549 |
|---|
| End bp | 2371253 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644984430 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_003142081 |
|---|
| Protein GI | 256820802 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.254375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGAT TACAAACTTC TGTAGACGTT GCAACTACTG CAACCGACAC TGCTCCCGTC
GCAGTACAAG AGAAAACCCT TTCTATAATG GAACTGATTC TAGATGGTGG TATGGGCAGT
ATCATTATTA TTGGTATCTT ATTTGTGATG CTCGCTGTAG CTCTTTTCCT CTATTTTGAA
CGCCTTTTTG CTATTAAGGC AGCTTCTAAG ATGGATAAAA CTTTTATGTA TAAAATACGT
GATTGTATCT CAGCTGGGCG CTTAGATGCT GCTAAAATGC TTTGTGTACA ATCGAATACT
CCCGTAGCAC GCCTTATTGA AAAAGGGGTC TCTCGTATAG GTAAACCTCT TGAAGATATC
AATAAAGCTA TTGAAAATGC AGGCACTTTA GAGGTCTACA ATCTTGAAAA GAACACGGCT
ATTCTCGCTA CTATTGCAGG AGCAGGACCT ATGATTGGAT TCTTAGGCAC AGTTGTTGGT
ATGATTATGT CATTCCACGA AATGGCTTCA GCAGGCGGTC AAGCAGAGAT GGGGTCGTTA
GCAAGTGGTA TCTATACCGC GATGGCAACT ACCGTAGCAG GGCTTATAGT AGGAATTATT
GCTTATGTAG GCTACAACCA CTTAGTAGTA AAAACTGATA AGGTGGTACA CCTAATGGAA
GCCAATGCTG TTGAATTCTT AGACTTGTTA AACGAACCTC TATAG
|
|---|
| Protein sequence | MLGLQTSVDV ATTATDTAPV AVQEKTLSIM ELILDGGMGS IIIIGILFVM LAVALFLYFE
RLFAIKAASK MDKTFMYKIR DCISAGRLDA AKMLCVQSNT PVARLIEKGV SRIGKPLEDI
NKAIENAGTL EVYNLEKNTA ILATIAGAGP MIGFLGTVVG MIMSFHEMAS AGGQAEMGSL
ASGIYTAMAT TVAGLIVGII AYVGYNHLVV KTDKVVHLME ANAVEFLDLL NEPL
|
|---|
| |