| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1920 |
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| Symbol | |
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| ID | 8368378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2306751 |
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| End bp | 2308205 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984372 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003142026 |
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| Protein GI | 256820747 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0707623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATAG TGCTCCGTCA ATCGTTTAAG AATGTGGTGG CTACCTATTT AGGGTTTGCC
ATAGGGGCAC TGAACACCCT TTTCTTGTTT ACTTACTTCC TCTCCAAAGC TCAGTACGGA
TTGGTGAGTT ATGTTACTTC CACTGCCACC ATTCTGTCCC CTCTTATCGC CTTTGGAGTG
AACAATACCT TGGTGCGTTA TTATACCGCT TATCGAGATA AAAAAGAGCA AGCGCAATTC
AACCTGATGC TTTGCTTTTT GCCTTTGCTC ATCATTGTGC CTGCCACCTT TGTCGGGATA
ATTGGGTACG AACAGATTGC GCAATGGCTT TCGGCTAAAA ACGAAGAAGT ACGCGATTAC
GTTTTTCTCA TCTTCCTCAC TTCCGTAGCG ATGGCTTACT TTGAAATTGC TTATGCGTGG
ACGCGCGTAC AGCTAAAAAC CGTCTTTGGC AATTTCCTAA AAGAGGTATT CCATAGGGTA
GGAGTGATGC TCCTGCTATT AGCCATTTAT TTGCAGCTCA TCGACTTTCA CCAACTGATA
TGGGGCGTAT TTTGGGTCTA TGCCTTGCGT ATGCTCTTGA TGTTTGTTTT CGCTTTCTAT
GTACGCCGAC CGCAATTTGC TTGGGGGTTG CCTAAGAACA AGAAAGAAGT CTTTTTGTAC
AGCCTTTTTG TGATTTTATC GGGGTCGGTA GCTTCTGTAT TGATGGATAT TGATAAGTTT
ATGCTCAACC AATACTTGCC TATCGGTGAG ATTGCCGTTT ATAATGTAGC CATTTTTACA
GCTACGGTGA TTGCTATTCC GTATAGGAGT ATGTACCAGA TTGTGAGTCC ACTGACGGCA
CAATTTATGA ATCAAAGCAA GCCAAAAGAG CTATCCGACC TGTATAAGCG TAGCACCGTG
AATACTTATT TTGTGAGTAT GGTGATTTGT GTGCTTATCA TCGTCAACGC CCAGCAGTGT
TATGCTCTTC TACCTGATAA GGATTACAGC ACAGGACTCA CGGTGCTTAT CATCATATCG
ATAGTAAAGC TATCGGACGC CTTAGTAGGT TTCAGCAATG CGGTATTACT CAATTCACCT
TACTATCGCA CCGTATTGTT TTTGGGTGTT TTTTTGGTCA TAGGCACCGT TTTAATGAAT
ATTTGGCTCA TACCGCTTTA CGGCATCAAT GGGGCGGGAT TAGCAACCCT AATCGCTTTT
AGTTCGTATA ACCTACTCAA GTCTGTTTTT GTGTATCGCA AATACAACTT GCAGCCTTTT
TATAAAGAAA CGTTACAGAC CACCCTCTTT GGTATCGTAG CCATAGGAGG TTTCTTCTTT
TGGGACTTTC CGTTTCACCC TCTTGTAAAT ATCAGCTTAA AATCATTACT CGTAGGGGGA
GTCAGTGTAT TTTTTCTTCT TAAATTGGGA ATTTCGGACG AGTTAATAAG GCTTATTCGC
CGATTTAGTA ATTAG
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| Protein sequence | MGIVLRQSFK NVVATYLGFA IGALNTLFLF TYFLSKAQYG LVSYVTSTAT ILSPLIAFGV
NNTLVRYYTA YRDKKEQAQF NLMLCFLPLL IIVPATFVGI IGYEQIAQWL SAKNEEVRDY
VFLIFLTSVA MAYFEIAYAW TRVQLKTVFG NFLKEVFHRV GVMLLLLAIY LQLIDFHQLI
WGVFWVYALR MLLMFVFAFY VRRPQFAWGL PKNKKEVFLY SLFVILSGSV ASVLMDIDKF
MLNQYLPIGE IAVYNVAIFT ATVIAIPYRS MYQIVSPLTA QFMNQSKPKE LSDLYKRSTV
NTYFVSMVIC VLIIVNAQQC YALLPDKDYS TGLTVLIIIS IVKLSDALVG FSNAVLLNSP
YYRTVLFLGV FLVIGTVLMN IWLIPLYGIN GAGLATLIAF SSYNLLKSVF VYRKYNLQPF
YKETLQTTLF GIVAIGGFFF WDFPFHPLVN ISLKSLLVGG VSVFFLLKLG ISDELIRLIR
RFSN
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