Gene Coch_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1908 
Symbol 
ID8368366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2295456 
End bp2295962 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content36% 
IMG OID644984360 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003142014 
Protein GI256820735 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT ATAGATTAGA TGAAATGGAT CTTAAGATAT TGGATATTCT TATAGAAGAT 
GCACGAAAAC CCTATATAGA TGTTGCTAAG GCACTTGATA TATCGTCGGG GACAGTGAAT 
GTACGGATAA GAAAAATGGA AGAATTGGAA ATTATAAAAA GTTCTGCCAT TTCAGTAGAT 
TACGAGAGAA TGGGATATAC TTTTATTGCT TATGTGGGTA TCTTTTTGGA GCGCAATCAT 
CAAGCTGAGT ATGTTTTGGA ACAATTAGAG GCTATCCCGT TTGTAACAGA GGCACACATT 
ACTTCAGGGA AATACAATCT GTTTTGTAAA ATTAGGACAA AGGGGGTGAA ACACGCTAAG 
GAAGTTATTT ATATGATAGA CGACATTCAA GGCGTGTCGC GCTCAGAGAC AATGATATCG 
ATGGAAGAGG CTTTTAACGA TAAGAGTCGT TTGCTTCATA AGGCTTTCCG AGAATTGGAT 
TTATATGATT TTTTAACTAC TAAATAA
 
Protein sequence
MAKYRLDEMD LKILDILIED ARKPYIDVAK ALDISSGTVN VRIRKMEELE IIKSSAISVD 
YERMGYTFIA YVGIFLERNH QAEYVLEQLE AIPFVTEAHI TSGKYNLFCK IRTKGVKHAK 
EVIYMIDDIQ GVSRSETMIS MEEAFNDKSR LLHKAFRELD LYDFLTTK