| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1895 |
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| Symbol | |
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| ID | 8368353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2281881 |
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| End bp | 2283782 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984347 |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003142001 |
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| Protein GI | 256820722 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAATG AACCTCTGTA CATACTCAAA AAGTATTGGG GGTACGATGG TTTTCGCAAC
TCTCAAGAAG CTGTTATCAA CTCGGTATTA TCCGGAAAAG ATACCTTAGC CTTATTGCCT
ACGGGTGGAG GAAAGTCTAT TACTTTTCAA GTGCCTGCTA TGATGAAAGA AGGCATCTGT
ATAGTTGTTT CTCCCTTAGT AGCCCTAATG ACAGACCAAG TAGAGGCGCT TAAAAATAGA
GAAATACGTG CACTATCGTT AGCGGGAGGT CTCCCCTACT CTGAGTTGGA ACGCTTGCTA
GACAATGCTC TCTATGGGCA ATATAAATTC TTATACCTGT CCCCTGAACG TCTGCAACAG
GAATTGGTGC GCTCTTATCT CAAAGCAATG TCTATTAACT TAATAGTGAT AGACGAAGCA
CATTGTGTAT CACATTGGGG TAAAGATTTT CGTCCTGCTT ATTTACAGTG TAAATGGCTG
AAAGAAGAAT TTCCTAACGT CCCATTATTG GCACTCACAG CTTCGGCAAC GCATCAAGTA
CAGCAAGATA TCTTACATCA TTTAGGTATA GAAAATGCTA CTGTTATCAC TACTTCTTTA
GCACGCCCTA ATATCGCTTA CAAAGTGTAT AAGGTTTCCG ATAAATGGCA CGAGTTACTA
CAACTGTTAA GAAAGACCGA AGGAAGTGCT ATCGTATACT TGCGCAGCAG AAATGGTTGC
ATACAATTGG CTGAACTATT GCAGAATCAC GGTATCTCAG CAGCCTATTT TCACGGAGGT
CTTCCTGCCG AAGAAAAGAA TAAAAAGCTC AGTATGTGGT TGCTGAACGA TGTGCGTGTA
ATGGCAGCTA CCAATGCTTT CGGAATGGGG ATAGACAAAC CTGATGTGCG TTTCGTAATT
CATTGGGATA TACCTCAAAC CTTAGAGGAC TATTTTCAAG AGGCTGGACG TGCAGGTCGC
GATGGTAACC CAGCCGAAGC TATCCTATTC TATGGTAAAA TCGACGTTGA AAATGCTAAT
AAACTGCTAA AAGACTACTT GGTAGACATT CCTTTTCTCA AGCTACTTTA TGCGAAACTT
AATGCTTATT TTCAAATAGC AATAGGTGAA GGACAAGAAG GGGTTTTTAG TTTCTTTTTC
CCCGACTTCT GGAAGCGTTA TCAGCTATCG CCCATAAAGT CCTATAATGG TTTGCAGGTG
TTAGACCGAA TGTCTATTAT TTCACTCAGC CAGCAATTTT ACAAGAAGGT TACTTTGCAT
ATTACAGCTC CTGCCCCTCA ACTTATTACT TATTTACAAA CGCATCGTTA TCTAAAAAAT
CTTGTTATCT ATCTCATAAG GTCTTACCCT CTTATCTACA GTCAGCCTAT AGCTTTGGAG
ATGGAAAAAA TCACTGAACT CACAGAACTC GACTATCGTG ATATCATCAA AAATTTAGAA
CATTTGCACA ACGATGGAAT GGCTATCTTA AAAAACGAAG CTTCTGATAT TCAAATTGTC
TTTAATGTGC CTCGTGATGA TGATCGCACT ATCAATAGTA TTTCTAAAAA CTTAAAAGAG
TACAATCACA CCAAGCTAAG CTTGCAAGAA GCAGTATTCC GCTATCTTCA AAATGAGGAT
ACTTGTCGCA ACATTCAGCT CTTAGAATAC TTCGGTGAAA AATCCGAGAA GCCTTGTGGA
GTATGTTCAA ATTGTATTGC CAAACTACCT CCTTCAAAAG TTGATAAAAA AGAGGTTAAA
AAAGCGGTTT GGAGTTTATT GAAGTCTAAA CCTATAACCC CCAATGAGCT CTTTATCGCA
TTGCCGTTCC CTGAAAAAGA TATCAATAAG GTTTTGGAAG AACTTTTGTA TATGCAAAAA
ATAGCTTACA ACAACTGTAA TGAATTAGTT GTTAATTCCT AA
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| Protein sequence | MENEPLYILK KYWGYDGFRN SQEAVINSVL SGKDTLALLP TGGGKSITFQ VPAMMKEGIC
IVVSPLVALM TDQVEALKNR EIRALSLAGG LPYSELERLL DNALYGQYKF LYLSPERLQQ
ELVRSYLKAM SINLIVIDEA HCVSHWGKDF RPAYLQCKWL KEEFPNVPLL ALTASATHQV
QQDILHHLGI ENATVITTSL ARPNIAYKVY KVSDKWHELL QLLRKTEGSA IVYLRSRNGC
IQLAELLQNH GISAAYFHGG LPAEEKNKKL SMWLLNDVRV MAATNAFGMG IDKPDVRFVI
HWDIPQTLED YFQEAGRAGR DGNPAEAILF YGKIDVENAN KLLKDYLVDI PFLKLLYAKL
NAYFQIAIGE GQEGVFSFFF PDFWKRYQLS PIKSYNGLQV LDRMSIISLS QQFYKKVTLH
ITAPAPQLIT YLQTHRYLKN LVIYLIRSYP LIYSQPIALE MEKITELTEL DYRDIIKNLE
HLHNDGMAIL KNEASDIQIV FNVPRDDDRT INSISKNLKE YNHTKLSLQE AVFRYLQNED
TCRNIQLLEY FGEKSEKPCG VCSNCIAKLP PSKVDKKEVK KAVWSLLKSK PITPNELFIA
LPFPEKDINK VLEELLYMQK IAYNNCNELV VNS
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