Gene Coch_1875 details

Gene Information

• Locus tag: Coch_1875
• ID: 8368328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2249072
• End bp: 2249671
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644984322
• Product: hypothetical protein
• Protein accession: YP_003141981
• Protein GI: 256820702

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGAAA TTCTTGTTAA ATATTTACCT GATAACGCAG TAACACCTTG TTTCGAACTG 
ATAAAAGTAA ACAACATCTA TTTGAGAATT GTAAACGAAC GAAAAACAAG GCACGGCGAT 
TATCGGCAAC TTCCTAACGG GCAACATCTC ATCACAATGA ATGCTACTGC TAATAAGTAT 
CGTTTCTTGA TAACTTTTAT TCACGAAGTG GCTCATCTGG TAGCTTTTGA ACGCTTTGGG 
CGGCTTATCA AACCTCACGG TAACGAATGG AAATACACTT TCCAACAACT GATGAAACCT 
TTTATCATCC CTGAGATATT CCCTCAGCAA TTATTAGGAG TATTACAACG GCACTTTGTC 
AACCCTATGT CCAGTAGTGA TGTAGACCCC GCATTGACAA TCGCCCTAAA ACAGTTTGAT 
ATCAATGAAA ATATGAGCTT TATTTATGAG ATTCCTTTAG GTAGTACGTT TCGTATCAAA 
GACGGACGCG TATTTCGCAA AGGACAACGC CGTGTGAAAT GTTATGATTG TGTGGAACTC 
GGCTCAGGCA AGAAGTATAT CTTTCAACCT CACGCCGAAG TAGAGCTCAT AAAGGCTTAA 

 

Protein sequence

MREILVKYLP DNAVTPCFEL IKVNNIYLRI VNERKTRHGD YRQLPNGQHL ITMNATANKY 
RFLITFIHEV AHLVAFERFG RLIKPHGNEW KYTFQQLMKP FIIPEIFPQQ LLGVLQRHFV 
NPMSSSDVDP ALTIALKQFD INENMSFIYE IPLGSTFRIK DGRVFRKGQR RVKCYDCVEL 
GSGKKYIFQP HAEVELIKA