| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1834 |
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| Symbol | metG |
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| ID | 8368282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2190063 |
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| End bp | 2192129 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984276 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_003141940 |
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| Protein GI | 256820661 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.726687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAC GTTATACCAT TACGGCAGCC CTACCCTATA CCAATGGACC TATTCACATC
GGTCATTTGG CGGGAGTATA TGTGCCAGCT GATATTTTTG CACGTTATCA ACGCTTAAAA
AACAACGATG TAGCCTTTAT TTGCGGAAGC GATGAACACG GAGTAGCCAT CTCTATCAAA
GCCAAAAAAG AAGGTACTAC CCCACAGGCT ATTATCGATA AATACCACGC GATTATCAAG
CAATCGTTTG CTGATTTTGG CATTTCATTC GACAACTATT CGCGTACTTC TGCCCCTATC
CATCACCAAA CAGCTTCCGA TTTCTTCAAA AAACTATATG AACAAGGTGA TTTTATAGAA
GAAATATCCG AACAACTCTA TGATGAAGAG GCACACCAAT TCCTTGCCGA CCGCTTTGTG
ATTGGTACTT GTCCGAAATG TGGTAACCCC GAGGCTTACG GCGATCAATG CGAGCGTTGT
GGTAGTTCAC TCAACGCTAC CGACCTCATC GACCCTAAAT CGTCAATCAC AGGTAGCAAA
CCTACGCTAA AAGCTACCAA ACACTGGTTT TTACCCCTCA ATCGTTACCA AGAGTTTTTG
GAAAAATGGA TATTAGAAGG TCACAAATCC GATTGGAAAC CTAATGTATA TGGGCAGGTA
AAAAGTTGGT TAGACGACGA ACTCAAACCG CGTGCTGTAA CCCGCGACCT CGATTGGGGA
ATTCCCGTAC CCGTAGAAGG CGCTGAAGGC AAAGTACTCT ACGTGTGGTT CGATGCGCCT
ATCGGTTATA TTTCTTCTAC TAAAGAGTGG GCTGAACGCG AAGGCAAAGA CTGGCGTCCT
TATTGGCAAG ACAGTGATAC CCAATTGGTG CATTTCATTG GGAAAGACAA TATCGTATTC
CATTGCATTA TCTTCCCAGC AATGCTCAAG GCTGAAGGTA GCTTTATACT GCCTGCAAAT
GTGCCTGCTA ATGAGTTCCT AAACTTAGAA GGCAACAAGC TCTCTACCTC CAAAAACTGG
GCTGTGTGGT TACACGAGTA CTTGCAAGAT TTTCCTAATC AGCAAGATGT ATTGCGTTAT
GTTCTTACCG CCAATGCTCC CGAAACCAAA GACAACGACT TTACTTGGAA AGACTTCCAA
GCGCGTAACA ACAACGAACT TGTGGCTATC TTTGGGAATT TCATCAATCG CGTGGCAGTG
CTAACGCAGA AATATTATGA AGGAGTAGTA CCACAAGCAG ATACTTATAA TAACGTAGAT
AATGAAACAC TTCGTCAAAT CACAGAACTT ACCGATAAGA TAGAACAATC ATTAGAACGT
TACCGTTTTC GCGAAGCCCA ACAAGAACTG ATGAATATGG CGCGCTTAGG CAATAAATAT
TTAGCTGATG AAGAACCCTG GAAACTCATC AAAACCGACC CTGAGCGCGT AAAGACTGTA
ATGTACATAG CTTTACAAAT TGCAACAGCT TTGGCAGTTG CTAGCGAACC TTTCTTGCCT
TTCACCTCCG AGAAACTCAA ACGTATGTTG CAATTGGGGA CAATTACTTG GGAGAGTCTA
AAAACAAACG CCACCGAATT GCTAAAAGCA GGACATCGCA TAGGTGTTGT AGAACTTCTT
TTCGAAAAGA TTGAAGATGC CGCTATCGAA AAGCAATTAC AGCGTTTAGA GAACACTAAA
TTAGCTAATA AGCAAGAAGC CCAAGCCAAT GCTGAAACTG AAGTAGCTCC ACAAAAAGAA
CTCATCAGTT ACGATGATTT TGCAAAGATG GATATTCGCA TTGGTACTAT CTTGGAAGCT
GAAAAGATGC CTAAGGCAGA TAAACTCCTC GTTTTAAAAG TAGATACAGG TATTGATAAA
CGTACTATCG TTTCGGGTAT AGCCCAAAGT TTCGCTCCTG AGGAGATTAT AGGTAAAAAG
GTAACTGTAT TGGTAAACCT TGCTCCGCGC AAACTACGCG GTGTAGAAAG CCAAGGAATG
ATACTAATGG TAGAAAATTC CGAAGGCAAA TACACCTTCA TCAATCCTGA TGCCGATGGA
ATTACTAATG GTACTGAAGT AAAATAA
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| Protein sequence | MSKRYTITAA LPYTNGPIHI GHLAGVYVPA DIFARYQRLK NNDVAFICGS DEHGVAISIK
AKKEGTTPQA IIDKYHAIIK QSFADFGISF DNYSRTSAPI HHQTASDFFK KLYEQGDFIE
EISEQLYDEE AHQFLADRFV IGTCPKCGNP EAYGDQCERC GSSLNATDLI DPKSSITGSK
PTLKATKHWF LPLNRYQEFL EKWILEGHKS DWKPNVYGQV KSWLDDELKP RAVTRDLDWG
IPVPVEGAEG KVLYVWFDAP IGYISSTKEW AEREGKDWRP YWQDSDTQLV HFIGKDNIVF
HCIIFPAMLK AEGSFILPAN VPANEFLNLE GNKLSTSKNW AVWLHEYLQD FPNQQDVLRY
VLTANAPETK DNDFTWKDFQ ARNNNELVAI FGNFINRVAV LTQKYYEGVV PQADTYNNVD
NETLRQITEL TDKIEQSLER YRFREAQQEL MNMARLGNKY LADEEPWKLI KTDPERVKTV
MYIALQIATA LAVASEPFLP FTSEKLKRML QLGTITWESL KTNATELLKA GHRIGVVELL
FEKIEDAAIE KQLQRLENTK LANKQEAQAN AETEVAPQKE LISYDDFAKM DIRIGTILEA
EKMPKADKLL VLKVDTGIDK RTIVSGIAQS FAPEEIIGKK VTVLVNLAPR KLRGVESQGM
ILMVENSEGK YTFINPDADG ITNGTEVK
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