Gene Coch_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1830 
Symbol 
ID8368278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2186690 
End bp2187952 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content41% 
IMG OID644984272 
ProductGlycine C-acetyltransferase 
Protein accessionYP_003141936 
Protein GI256820657 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.219608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT TATTTGAGCA TATTTATGCA AATAAAGGAA GTATAGGGCG CTGGTCTGAC 
CACGCCGAGG GGTATTATGT ATTCCCTAAA TTGGAAGGCG AATTAGGCCC TCATATGAAA
TTTCAAGGAA AAGAAATCCT CAACTGGAGT ATCAACGACT ATTTAGGGCT TGCCAATCAT
CCTGAAGTCC GCAAAGTAGA TGCCGAAGCA GCTGCCGAGT ATGGTGCTGC TTACCCTATG
GGGGCTCGTA TGATGAGCGG GCATACTACT ATGCACGAAG AACTCGAAAA ACGTTTAGCC
AAATTTGTAC ACAAAGAAGC ATCTTATTTG CTCAACTTTG GTTACCAAGG AATGGTGTCT
ATTATCGATG CTTTGGTTAC TAAAAACGAT GTGATTGTAT ACGATGTTGA TGCACACGCT
TGTATTATCG ATGGGGTACG CTTGCACTTT GGTAAACGCT ATACCTATCA ACACAACGAT
ATGGAGAGCT TTGAGAAAAA CTTAGAGCGT GCGGCTAAAT TAGCTGAAAC TACAGGAGGC
GGTATCTTGG TGATTTCAGA AGGTGTTTTC GGGATGCGTG GTGAACAAGG CAAACTTAAA
GAAATCGTAG CTCTTAAAAA GAAATATCCT TTCCGCCTTT TGGTAGACGA TGCGCACGGT
TTTGGTACCT TAGGTCCTCG TGGAGAAGGA ACTGGTGTTC ACCAAGGCGT ACAAGATGAA
ATTGATGTTT ATTTTTCTAC TTTTGCTAAA TCAATGGCAG GTATTGGAGC TTTCGTTGCT
GGAAATGCTA AAGTAGTGGA CTACCTCAAA TACAATCTCC GCTCTCAAAT GTTTGCTAAA
TCACTTCCAA TGATTTATGT AAAAGGAGCT TTGAAACGTT TGGAAATGAT GGAAACAATG
CCCGAACTAC AACAAAAGTT ATGGGACAAT GTAAATCGTT TGCAAAACGG ACTTAAAGAA
CGTGGTTTCA ATATCGGTAA TACCAATACT TGCGTAACGC CTGTATTCTT GCATGGTAGT
ATTCCTGAGG CAATGGCTAT GGTAAACGAC CTACGTGAGC ACTATGGTAT CTTCTTGTCG
ATAGTAGTTT ATCCTGTGAT TCCAAAAGGA ATGATACTTT TGCGCATTAT TCCTACCGCT
TCACACAGTA AAGAAGATAT CGACCGCACT TTGGAAGCAT TCTCAGCGAT TCGTGAGAAA
CTCGAAACAG GCGTATACCG CGCTATAAAT GCTGAACTTA CTAAAGAAAT GGGAGATATG
TAA
 
Protein sequence
MKDLFEHIYA NKGSIGRWSD HAEGYYVFPK LEGELGPHMK FQGKEILNWS INDYLGLANH 
PEVRKVDAEA AAEYGAAYPM GARMMSGHTT MHEELEKRLA KFVHKEASYL LNFGYQGMVS
IIDALVTKND VIVYDVDAHA CIIDGVRLHF GKRYTYQHND MESFEKNLER AAKLAETTGG
GILVISEGVF GMRGEQGKLK EIVALKKKYP FRLLVDDAHG FGTLGPRGEG TGVHQGVQDE
IDVYFSTFAK SMAGIGAFVA GNAKVVDYLK YNLRSQMFAK SLPMIYVKGA LKRLEMMETM
PELQQKLWDN VNRLQNGLKE RGFNIGNTNT CVTPVFLHGS IPEAMAMVND LREHYGIFLS
IVVYPVIPKG MILLRIIPTA SHSKEDIDRT LEAFSAIREK LETGVYRAIN AELTKEMGDM