Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1830 |
Symbol | |
ID | 8368278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2186690 |
End bp | 2187952 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644984272 |
Product | Glycine C-acetyltransferase |
Protein accession | YP_003141936 |
Protein GI | 256820657 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.219608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGATT TATTTGAGCA TATTTATGCA AATAAAGGAA GTATAGGGCG CTGGTCTGAC CACGCCGAGG GGTATTATGT ATTCCCTAAA TTGGAAGGCG AATTAGGCCC TCATATGAAA TTTCAAGGAA AAGAAATCCT CAACTGGAGT ATCAACGACT ATTTAGGGCT TGCCAATCAT CCTGAAGTCC GCAAAGTAGA TGCCGAAGCA GCTGCCGAGT ATGGTGCTGC TTACCCTATG GGGGCTCGTA TGATGAGCGG GCATACTACT ATGCACGAAG AACTCGAAAA ACGTTTAGCC AAATTTGTAC ACAAAGAAGC ATCTTATTTG CTCAACTTTG GTTACCAAGG AATGGTGTCT ATTATCGATG CTTTGGTTAC TAAAAACGAT GTGATTGTAT ACGATGTTGA TGCACACGCT TGTATTATCG ATGGGGTACG CTTGCACTTT GGTAAACGCT ATACCTATCA ACACAACGAT ATGGAGAGCT TTGAGAAAAA CTTAGAGCGT GCGGCTAAAT TAGCTGAAAC TACAGGAGGC GGTATCTTGG TGATTTCAGA AGGTGTTTTC GGGATGCGTG GTGAACAAGG CAAACTTAAA GAAATCGTAG CTCTTAAAAA GAAATATCCT TTCCGCCTTT TGGTAGACGA TGCGCACGGT TTTGGTACCT TAGGTCCTCG TGGAGAAGGA ACTGGTGTTC ACCAAGGCGT ACAAGATGAA ATTGATGTTT ATTTTTCTAC TTTTGCTAAA TCAATGGCAG GTATTGGAGC TTTCGTTGCT GGAAATGCTA AAGTAGTGGA CTACCTCAAA TACAATCTCC GCTCTCAAAT GTTTGCTAAA TCACTTCCAA TGATTTATGT AAAAGGAGCT TTGAAACGTT TGGAAATGAT GGAAACAATG CCCGAACTAC AACAAAAGTT ATGGGACAAT GTAAATCGTT TGCAAAACGG ACTTAAAGAA CGTGGTTTCA ATATCGGTAA TACCAATACT TGCGTAACGC CTGTATTCTT GCATGGTAGT ATTCCTGAGG CAATGGCTAT GGTAAACGAC CTACGTGAGC ACTATGGTAT CTTCTTGTCG ATAGTAGTTT ATCCTGTGAT TCCAAAAGGA ATGATACTTT TGCGCATTAT TCCTACCGCT TCACACAGTA AAGAAGATAT CGACCGCACT TTGGAAGCAT TCTCAGCGAT TCGTGAGAAA CTCGAAACAG GCGTATACCG CGCTATAAAT GCTGAACTTA CTAAAGAAAT GGGAGATATG TAA
|
Protein sequence | MKDLFEHIYA NKGSIGRWSD HAEGYYVFPK LEGELGPHMK FQGKEILNWS INDYLGLANH PEVRKVDAEA AAEYGAAYPM GARMMSGHTT MHEELEKRLA KFVHKEASYL LNFGYQGMVS IIDALVTKND VIVYDVDAHA CIIDGVRLHF GKRYTYQHND MESFEKNLER AAKLAETTGG GILVISEGVF GMRGEQGKLK EIVALKKKYP FRLLVDDAHG FGTLGPRGEG TGVHQGVQDE IDVYFSTFAK SMAGIGAFVA GNAKVVDYLK YNLRSQMFAK SLPMIYVKGA LKRLEMMETM PELQQKLWDN VNRLQNGLKE RGFNIGNTNT CVTPVFLHGS IPEAMAMVND LREHYGIFLS IVVYPVIPKG MILLRIIPTA SHSKEDIDRT LEAFSAIREK LETGVYRAIN AELTKEMGDM
|
| |