| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1774 |
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| Symbol | |
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| ID | 8368220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2113701 |
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| End bp | 2114780 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644984214 |
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| Product | isochorismate synthase |
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| Protein accession | YP_003141880 |
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| Protein GI | 256820601 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00644261 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTA AAACTGAAGA TTATATTTCA TTTGAAGAAC TTTTAAAACA AGTACAGCAC
AAATATGCTG AACACTTACC TTTTGTGTGC TACAAGCCCC CTTATCACAC TTCAGTAATA
TTGTTGCAAC AAGAAGATGA TACACTTCAT TTTTTTAACG CTGATAAAGA AGAACAAGAG
GGATTTGTTT TCGCTCCTTT CGATGCTAAC GAACCTGCTG TTATCATCAC TGCTAACAAA
GTTACCGTAA GTCATTTGCC TACACAATCG ATTGTAGAAA ATACTAATAT TGATATTTTA
GAAGATACCG AAGCTGAAAA ACAAAAGCAC ATAGGTTTAG TAACCAAAGC TATTGATGAG
ATACACAGAG GTCATTTTGA GAAAGTGGTT CTTTCGCGCA AGATAACTAT CAAAGAAGTG
GTAAATCCGT TTAAGAGCTT TGCCAATATG GTAACACGAT ATCCTTCGGC ATTTTGCTAT
TTGTTTTATC ACCCAAAAGT AGGAACTTGG ATGGCTGCTA CGCCCGAAAC ACTCTTCCGC
GGTAATGGCG AAGATTTTTG CACAATGGCA TTAGCAGGGA CACAACCTTT TAAAGAAGGT
GAGATACATT GGCATACTAA GGAAAAAGAA GAACAGCAAA TAGTTACTGA TACCATCGTG
CAGCAGTTAC AAGAGTATGT TAATGAACTT GAAGTTTCAG CAGTTAAAAC TGTGCAAGCA
GGAAATGTGA TGCATTTATG TACTGAAATT AAAGGAAAGA TAGCTCCTGA TAAAGTATAT
GAGTTAATAA AACGTCTGCA CCCTACACCA GCCGTCTGTG GTTATCCTAC TGAGGAAGCT
CGCACTTTTA TTATAGAAAA CGAACTTTAT AAAAGGCAAT ATTACACAGG CTATTGTGGC
TGGGTGTCCA GCAATAACCA AGCATTCTAT GTGAATTTGC GTTGTATGCA AATCACTGAT
AACGAAGCCT ATTTGTATGT AGGTGGAGGT ATTACCAAAG ACTCCATTCC TGAAAAAGAA
TATGAGGAAA CACAGAACAA AACGCAAACA ATGAAATCGG TAATTTCTGT TGAAAAATAG
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| Protein sequence | MKIKTEDYIS FEELLKQVQH KYAEHLPFVC YKPPYHTSVI LLQQEDDTLH FFNADKEEQE
GFVFAPFDAN EPAVIITANK VTVSHLPTQS IVENTNIDIL EDTEAEKQKH IGLVTKAIDE
IHRGHFEKVV LSRKITIKEV VNPFKSFANM VTRYPSAFCY LFYHPKVGTW MAATPETLFR
GNGEDFCTMA LAGTQPFKEG EIHWHTKEKE EQQIVTDTIV QQLQEYVNEL EVSAVKTVQA
GNVMHLCTEI KGKIAPDKVY ELIKRLHPTP AVCGYPTEEA RTFIIENELY KRQYYTGYCG
WVSSNNQAFY VNLRCMQITD NEAYLYVGGG ITKDSIPEKE YEETQNKTQT MKSVISVEK
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