Gene Coch_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1772 
Symbol 
ID8368218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2111229 
End bp2111858 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content40% 
IMG OID644984212 
Productprotein of unknown function UPF0126 
Protein accessionYP_003141878 
Protein GI256820599 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000240599 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATT TTATTAATGT ACTATCACAG ATAGACCAGA TTTATCTCTG GGACTTAATA 
GGAACGGCTG TATTTGGTAT TTCGGGCGTG TTAGTGGGGT TAGAACGCCG TATGGACATA 
TTTGGAATGC TTATTTTAGC CTTTGTAACA GGGGTAGGAG GGGGAACGCT CCGCGATATT 
ATGATAGGCA GTGTACCGGT ATTCTGGATG AACAATCTTA CGTATATATT GATGATAGTC 
ATTAGTGTAG TGATTACCGT TGTTTTCAAA AAGCAATTCT CTGAGCATTG GAGCAAATCG 
CTGATGGTGT TTGATACTAT AGGGCTGGGA GTGTTTACTA TCATCGGGAT AGAAAAAGCA 
TTGCGTTTTG GCTTGTCGCC TACTATTGCT ATCATCTTAG GTACGATGAC AGGTAGCTTC 
GGAGGAGTTA TTCGGGATAT ATTAGCCAAC AAACTACCTG CTGTCTTCCA CAAAGAGATT 
TACGCAACGG CTTGCATAGC AGGAGGTACT GTTTATTTCC TTATTGATAA CTTTGTAAAT 
CACAACTTAG TAGTATTTAT TACCATAATA GTAGTTATAG CTGTGCGATT GCTATCGGTA 
AAATACCATT GGGAGTTGCC GAAGTTTTAA
 
Protein sequence
MEDFINVLSQ IDQIYLWDLI GTAVFGISGV LVGLERRMDI FGMLILAFVT GVGGGTLRDI 
MIGSVPVFWM NNLTYILMIV ISVVITVVFK KQFSEHWSKS LMVFDTIGLG VFTIIGIEKA 
LRFGLSPTIA IILGTMTGSF GGVIRDILAN KLPAVFHKEI YATACIAGGT VYFLIDNFVN 
HNLVVFITII VVIAVRLLSV KYHWELPKF