Gene Coch_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1763 
Symbol 
ID8368209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2102334 
End bp2102948 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content33% 
IMG OID644984203 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_003141869 
Protein GI256820590 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TCTTAATATT CCTTATTTCT GTTGCACCTT TAACAATCAG TGCCCAAGCC 
CTTACCGAAG TCCAAATACG CGACTTCAAA ACTCAAACTA TTGCTAAAAA CAAGGTAATT 
CAAACAATGC AAGCGGATTT TATTCAGAAA AAACACTTAG ATTTTATGAG TAAAGATATT 
GAGACTTTTG GAAAAATGGC ATTCGCTAAA CCAGATAAAT TGAATTGGCA ATATACAAAA 
CCTTACCAGT ATCGGATTGT TTTTCAGAAA GATAAAATTA CAGTAAACGA TGCAGGTAAT 
ATCTCACAGA TGAAGGCCGA TAATAAAGTC TTCAAAAAAA TAAATAACCT CATTGTGAGT 
TCTATCAGTG GCGATATGTT CAACGAGAAA GAATTTGCTA TGACCTTTGC CAAATCGGGC 
AAAAGTATAT TGGTAAAACT ATTGCCCAAG GATAAGACGC TTTTGAAATA CGTGAGTGAA 
ATTCATCTGT ATTTTGATGT TGATAGTGTC GTGGAACGTG TAAAACTCAT AGAACCCTCG 
AAAGACTACG CCGAAATCTT ATTCAGCAAT AAAAAACTAA ATACAAAAAT TGATGAAGCA 
AATTTTAAAA TGTAG
 
Protein sequence
MKKLLIFLIS VAPLTISAQA LTEVQIRDFK TQTIAKNKVI QTMQADFIQK KHLDFMSKDI 
ETFGKMAFAK PDKLNWQYTK PYQYRIVFQK DKITVNDAGN ISQMKADNKV FKKINNLIVS 
SISGDMFNEK EFAMTFAKSG KSILVKLLPK DKTLLKYVSE IHLYFDVDSV VERVKLIEPS 
KDYAEILFSN KKLNTKIDEA NFKM