Gene Coch_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1742 
Symbol 
ID8368188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2077866 
End bp2079260 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content40% 
IMG OID644984182 
ProductPhosphomannomutase 
Protein accessionYP_003141848 
Protein GI256820569 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAA TCAAATCAAT CTCAGGTATT CGTGGTACTA TTGGAGGTGT ACCCGATGAA 
AATCTAACCC CTATCGATGC CGTAAAATTC GCTGCCGCTT ATGGTACGTG GCTCAAAGAA
ACCCTCAACA AAGCAAATAT AAAGGTAGTT GTAGGAAGAG ACGCACGTAT TTCGGGCGAA
ATGATACAGA ACTTAGTACA ATACACCCTT GTAGGATTAG GCATTAATGT AGTGGATATC
GGGCTAAGTA CAACTCCTAC CGTCGAAGTA GCTGTTACAA TGGAAAAAGC CGATGGGGGC
ATTATTCTCA CTGCAAGTCA TAATCCTAAA CAGTGGAACG CCCTAAAACT TCTCAATAAT
AAGGGAGAGT TCCTCAGTGC TAAAGAAGGT GAAAGAATTC TAACCATTGC TCAAGAGAAT
AAGGTGGTTT TTGCTGACGT AGAAGCTTTA GGAAGCATTT CTCACGATAA TACCTATATT
CAAAAACATA TTGAGGCAGT GTTAGGGTTG CTAACATCCT CCACTATCGA AGCCATACGC
AATTGTAAAT TCAAAGTGGT TGTTGATGCG GTGAACTCCA CAGGAGGCAT TGCAATTCCA
AAGTTATTAG AACGTTTTGG CGTAGAAGTA GTTCGTTTGT ATTGTGAACC AAACGGACAT
TTTCCTCATA ACCCCGAACC TTTAAAAGAA CATTTGGGAG ACATCTGCAA AAAAGTACTT
GAAGAAAAAG CCGATTTTGG TATCGTAGTA GACCCCGATG TAGATAGATT AGCTTTTATT
ACGGAAGAAG GTGAAATGTT CGGCGAAGAA TATACTTTGG TTGCTTGCGC CGATTATATT
TTAGGAAAAA CCAAAGGAAA TGTAGTCTCT AACCTCTCTT CTTCTCGTGC ATTGAGAGAT
ATAGCCGAAA AGCACGGAGT ACAGTATGCT GCAGGAGCTG TAGGTGAAGT AAACGTAGTT
GCTAAAATGA AGGAAGTGCA CGCAATCATA GGTGGTGAAG GCAATGGAGG TATTATCTAT
CCTGAACTAC ACTATGGTCG TGACGCTTTG GTAGGTGTAG CGTTATTCCT TTCCTTACTT
GCTGAAAGAA AATGCAGTGT AAAGACCTTG CGCAATAGTT ATCCTGCTTA TTATATGAGC
AAGAACAAAA TACAACTTAC CAAAGACATT AACCCCGATA ATATCCTACG TGAAATGCAA
AAGAAGTACG CACACGAGCA AATCAATACT ATCGATGGCT TAAAGATTGA TTTTCCTCAA
AGCTGGGTAC ACTTGCGAAA ATCTAATACT GAACCTATTA TTCGCATTTA CACTGAAGCT
AAAAGTCAAG TAGAAGCCGA TAAACTCGCT CTGCGTTTCA TTGAAGAAAT GAAAGCTGTT
GCTTTTGCAA AGTAA
 
Protein sequence
MSLIKSISGI RGTIGGVPDE NLTPIDAVKF AAAYGTWLKE TLNKANIKVV VGRDARISGE 
MIQNLVQYTL VGLGINVVDI GLSTTPTVEV AVTMEKADGG IILTASHNPK QWNALKLLNN
KGEFLSAKEG ERILTIAQEN KVVFADVEAL GSISHDNTYI QKHIEAVLGL LTSSTIEAIR
NCKFKVVVDA VNSTGGIAIP KLLERFGVEV VRLYCEPNGH FPHNPEPLKE HLGDICKKVL
EEKADFGIVV DPDVDRLAFI TEEGEMFGEE YTLVACADYI LGKTKGNVVS NLSSSRALRD
IAEKHGVQYA AGAVGEVNVV AKMKEVHAII GGEGNGGIIY PELHYGRDAL VGVALFLSLL
AERKCSVKTL RNSYPAYYMS KNKIQLTKDI NPDNILREMQ KKYAHEQINT IDGLKIDFPQ
SWVHLRKSNT EPIIRIYTEA KSQVEADKLA LRFIEEMKAV AFAK