Gene Coch_1730 details

Gene Information

• Locus tag: Coch_1730
• Symbol: sucC
• ID: 8368176
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2063171
• End bp: 2064364
• Gene Length: 1194 bp
• Protein Length: 397 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 644984170
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_003141836
• Protein GI: 256820557
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTAC ACGAATACCA AGGAAAGGAA ATCCTTTCGA GTTTTGGGGT GCGCGTACAA 
CGTGGTATCG TTGCTCACAC CCCCACCGAA GCCGTAGAGG CAGCCAAACA ACTCACCGAA 
GCCACTAATA CTCAGTGGTA CGTGGTAAAA GCACAAGTAC ACGCCGGAGG GCGTGGAAAA 
GGCGGTGGCA TTAAGTTAGC TAAAGGTTTA GACCAAGTAG AGCCTATAGC TTCTCAAATT 
ATAGGTATGC AACTCGTTAC CCCTCAAACG CCCCCCTCAG GGAAAAAAGT ACATCAAGTG 
CTCATCGCCG AAGATGTATA TTATCCTGGA GAAAGCGAGC CTAAAGAGTT CTATATGTCG 
GTACTATTGA ATCGTGCCAA AGGTAAAAAT ATGATTATGT ATTCTACCGA AGGAGGAATG 
GATATTGAGG CAGTTGCCGA AAAAACGCCA CACCTTATCT TCACCGAAGA AATCGACCCT 
GCCGTAGGGC TCTTACCTTT CCAAGCTCGC CAGATTGCTT TCAACTTAGG CGTTACGGGT 
GAGGCTCAAA AAGAAATGGT GAAGTTCGTA ACAGCACTCT ACAATGCTTA TGTGTCTTCT 
GATGCTAGCT TGTTTGAAAT CAACCCTGTT CTAAAAACTT CTGATAATAA AATAATGGCA 
GTAGATGCCA AAGTAACTCT TGATGACAAT GCACTTTTCC GTCACCCTGA GTATGCGGCT 
TATCGCGATA CACGAGAGGA AAACCCAGTA GAAGTAGAAG CTAAAGCCGT TGGGCTCAAC 
TATGTTGCTC TCGATGGTAA CGTGGGCTGT ATGGTAAACG GTGCCGGACT CGCAATGGCT 
ACGATGGACT TGATTAAACA AGCGGGGGGT TCACCTGCTA ACTTCCTTGA TGTAGGAGGT 
ACCGCCGATG CCAAACGCGT AGAAGCTGCT TTCCGTATTA TCCTCAAAGA CCCTAATGTA 
AAGGCTATCC TTATCAATAT CTTTGGTGGT ATTGTGCGTT GCGACCGTGT AGCACAAGGG 
GTAGTAGATG CCTACCAAAA TATGGGCGAT GCTATCAAAG TGCCTATCAT AGTGCGCTTG 
CAGGGTACGA ATGCCGAGCT TGCTAAAGAA ATATTAGACA ATTCAGGCTT AGCGGTTCAC 
TCAGCAATCC TCTTCCAAGA AGCCGCCGAT AAAGTAAAAG AAGTATTACA ATAA 

 

Protein sequence

MNLHEYQGKE ILSSFGVRVQ RGIVAHTPTE AVEAAKQLTE ATNTQWYVVK AQVHAGGRGK 
GGGIKLAKGL DQVEPIASQI IGMQLVTPQT PPSGKKVHQV LIAEDVYYPG ESEPKEFYMS 
VLLNRAKGKN MIMYSTEGGM DIEAVAEKTP HLIFTEEIDP AVGLLPFQAR QIAFNLGVTG 
EAQKEMVKFV TALYNAYVSS DASLFEINPV LKTSDNKIMA VDAKVTLDDN ALFRHPEYAA 
YRDTREENPV EVEAKAVGLN YVALDGNVGC MVNGAGLAMA TMDLIKQAGG SPANFLDVGG 
TADAKRVEAA FRIILKDPNV KAILINIFGG IVRCDRVAQG VVDAYQNMGD AIKVPIIVRL 
QGTNAELAKE ILDNSGLAVH SAILFQEAAD KVKEVLQ