Gene Coch_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1719 
Symbol 
ID8368165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2052105 
End bp2052623 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content40% 
IMG OID644984159 
Productadenine phosphoribosyltransferase 
Protein accessionYP_003141825 
Protein GI256820546 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0453146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA AAGAATATAT CAAAAGTAAA ATTAGAGATA TTAAAGATTT TCCTAAAGAG 
GGAATTATCT TCAAAGATAT TACACCATTG CTAATGGATG TGAAAGCAGG GCAATATGTA
ATCGACTTGC TCGTGGAGAA CCTGCACGGA CAGAAAATAG ACAAAGTAGT GGGTATGGAA
AGTAGAGGTT TTTTCTTTGG GATGTTGCTT GCACAACGAT TGGGGGCTGG CTTTGTACCG
GTGCGCAAAA AAGGTAAATT ACCTTACAAA ACCCTCTCAC AAACCTACGA TTTGGAGTAC
GGACAAGACG TATTGGAAAT TCACGCAGAC GCTATTGTGA AAGGTGAAAA AATCCTTATT
CACGACGATA TCCTCGCTAC TGGTGGTACT GCTGAAGCGG TAGTAAAACT TGTAGAACGC
CTCGGTGGCG ATATTGTACA ACTAGATTTC TTGATGGAAC TCCACTTTCT GAACGGCAGA
GAGAAACTCA AAGGACACCC TGTGTATAGC ATTTTATAA
 
Protein sequence
MDKKEYIKSK IRDIKDFPKE GIIFKDITPL LMDVKAGQYV IDLLVENLHG QKIDKVVGME 
SRGFFFGMLL AQRLGAGFVP VRKKGKLPYK TLSQTYDLEY GQDVLEIHAD AIVKGEKILI
HDDILATGGT AEAVVKLVER LGGDIVQLDF LMELHFLNGR EKLKGHPVYS IL