Gene Coch_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1707 
Symbol 
ID8368153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2040609 
End bp2042237 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content46% 
IMG OID644984147 
ProductPropionyl-CoA carboxylase 
Protein accessionYP_003141813 
Protein GI256820534 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTC AATTCAATAC AAACGAAGAT TACAATAAAT TAGCCCTTAG TCAGTTGCGC 
AAACGCTTGA AAAAAGTAAA AGAAGGCGGG GGCAAAAAGA ACCTCGAAAA GCTTCACAGC
CAAGGTAAAC TTTCGGCTCG TGAACGCATA GAGTATCTGT TAGACAACAA TAAACCCCAA
ATAGAAATAG GCGCTTTTGC CGGTGAGGGA ATGTACGAAG AACACGGCGG TTGCCCCTCG
GCTGGTGTAG TGGTGGTGAT AGGCTATGTA GCTGGTAGAC AATGCGTAGT AGTAGCTAAC
GACGCTACTG TAAAGGCGGG AGCGTGGTTT CCTATTACTG CCAAAAAGAA CCTACGCGCT
CAAGAAATTG CGATGGAGAA CCGATTACCT ATCATCTATT TGGTGGATAG TGCAGGGGTG
TACTTGCCTT TGCAGGACGA GATTTTTCCC GATAAGGAAC ACTTTGGTCG CATCTTTCGC
AACAATGCCC TGATGAGTAG TATGGGCATC ACCCAAATAG CCGTAGTAAT GGGCAGTTGT
GTGGCGGGAG GGGCTTATCT GCCTATAATG AGCGATGAGG CACTGATAGT AGATAAAACG
GGCAGTATCT TCTTAGCGGG TAGCTATTTA GTGAAGGCTG CGATAGGCGA AAACATCGAT
AATGAAACCT TAGGTGGAGC CACTACCCAT TGCGAAATTA GCGGGGTGAC CGACTACAAA
GCAACCGATG ATAAAGACGC TCTCGACCGT GTACGCCGTA CAATGGCTAA ACTTGCCGAT
GCCGAAAAAG CGGGCTTTAA CCGCATTGAA GCTCATAAAC CGCTGAAAGA CCCTAACGAA
ATTTACGGTA TCTTGCCTAA ATTGCGCACA GAGCCTTATG ATATGAAGGA AATTATCCTT
CGATTGGTAG ACAATTCAGA ATTTGACGAA TATAAAGAAG GGTACGGACA AACTATTCTC
ACGGGCTATG CGCGTATTGA GGGTTGGGCG GTAGGCATTG TTGCTAACCA GCGCAAAGTC
GTAAAAACTA AGAAAGGAGA AATGCAGTTT GGAGGAGTAA TCTACTCGGA TAGTGCCGAC
AAAGCGACCC GCTTTATTGC GAATTGCAAC CAAAAGAAAA TTCCTTTGCT CTTCTTGCAA
GATGTTACCG GTTTTATGGT AGGCTCCAGA TCAGAGCACG GAGGGATTAT CAAAGATGGG
GCTAAACTTG TGAATGCGGT TGCTAATTCG GTAGTGCCCA AATTTACGGT CGTGATAGGT
AACTCGTATG GGGCTGGTAA CTACGCAATG TGCGGTAAGG CTTACGACCC GCGTCTTATC
GTATCCTGGC ACAGTGGAAA CATTTCGGTA ATGGGAGGTA CGCAAGCTGC TAAAGTACTC
TTGCAGATAG AAACTGCCAA CCTAAGGAAA AAAGGAGAGG AACTTACCCC TGAAAAAGAA
GCCGTGCTTT TTGCTCATAT CAAAGAGCAA TACGACGAGC AGATATCACC CTACTACGCC
GCTGCTCGCC TTTGGACGGA TGCTATTATA GACCCATTAG AAACCCGCCA ATGGATAGCA
ATGGGTATAG AAGCTGCCAA CAACGCCCCC ATCGAAAGAG CGTTTAATTT GGGTGTGATA
CAAGTATAA
 
Protein sequence
MDIQFNTNED YNKLALSQLR KRLKKVKEGG GKKNLEKLHS QGKLSARERI EYLLDNNKPQ 
IEIGAFAGEG MYEEHGGCPS AGVVVVIGYV AGRQCVVVAN DATVKAGAWF PITAKKNLRA
QEIAMENRLP IIYLVDSAGV YLPLQDEIFP DKEHFGRIFR NNALMSSMGI TQIAVVMGSC
VAGGAYLPIM SDEALIVDKT GSIFLAGSYL VKAAIGENID NETLGGATTH CEISGVTDYK
ATDDKDALDR VRRTMAKLAD AEKAGFNRIE AHKPLKDPNE IYGILPKLRT EPYDMKEIIL
RLVDNSEFDE YKEGYGQTIL TGYARIEGWA VGIVANQRKV VKTKKGEMQF GGVIYSDSAD
KATRFIANCN QKKIPLLFLQ DVTGFMVGSR SEHGGIIKDG AKLVNAVANS VVPKFTVVIG
NSYGAGNYAM CGKAYDPRLI VSWHSGNISV MGGTQAAKVL LQIETANLRK KGEELTPEKE
AVLFAHIKEQ YDEQISPYYA AARLWTDAII DPLETRQWIA MGIEAANNAP IERAFNLGVI
QV