| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1692 |
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| Symbol | |
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| ID | 8368138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2020853 |
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| End bp | 2023060 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644984132 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003141798 |
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| Protein GI | 256820519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.739915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCAG AAGTAAAAAA AGAAATCATC GAATTAGGTG ATGGTCGTAC CATCACTATC
GAAACTGGCA AGTTGGCTAA ACAAGCCGAC GGTGCTGTTG TGGTGCAAAT GGGGAATGCG
ATGCTATTGG CAACTGTAGT ATCGGCTAAA GAAATCAATC CTGAAACTGA CTTTTTACCT
CTTACTGTAG ACTATCGTGA GAAGTTTGCA GCAGCAGGTC GTTTCCCTGG AGGCTTTTTC
AAACGTGAAA CACGACCTAG CGACCAAGAA ATTCTTACAA TGCGCTTGGT TGACCGCGTA
TTGCGCCCAC TATTCCCTAA AGATTATCAC GCTGAAACAC AAGTGATGAT CCAGCTTATC
TCTCACGACG AGAATGTAAT GCCCGATGCT TTAGCGGGGC TTGCTGCCTC TGCTTGTTTG
GCTGTGTCCG ACATTCCTTT TGATGGTCCT ATTTCCGAAG TACGCGTAGG TCGTGTAAAC
GGTCAATTTA TCGTAAACCC AAGTCGTGAA CAATTAGAAG CTTCTGATAT TGATATTATG
GTAGGTGCTT CTAAAGACTT CGTGGCAATG GTAGAAGGAG AAATGGACGA GGTGAGCGAA
AAAGATATGG CTGAAGCTAT CAAATTCGCA CACGAGGCTA TCAAACCTCA TATTGAGGCA
CAATTGCGTT TGGCTGAAAA AGTAGGTAAG ACTGAAAAAC GTACTTATGA GCCAGAAGTA
GAAAACGAGG AAGTAAAAGC AAAAGTATAT CCTTTGGCTT ACGAAAAATG CTATGCTATT
GCCAAAGAAA ATACAACCAA ACAAGAACGT GGCGAGAAGT TCAATGCGGT AAAAGAAGAA
TGCTTAGCAC TCTTCACCGA AGAAGAATTA GAAGAACTCA CGCCTATCAT CACTCGTTAT
TTTGACGAGG CTGAGAAAGA AGCCGTGCGC AACCTTATCT TAAACGAAAA TATCCGTTTA
GATGGTCGTA ACACTACCCA AATACGCCCT ATTTGGTGTG AAGTAGGCTA CTTGCCATCA
GCACACGGTT CATCTATTTT TACTCGTGGT GAAACCCAAT CACTTACTAC CGTTACCTTG
GGGACTTCAC GCGAAGCAAA CGTGATTGAT TTGCCTTCAG AACAAGGTGA AGAACGTTTC
TACTTGCATT ACAACTTCCC TCCTTTCTCT ACTGGTGAAG CACGCCCTTT GCGCGGAACA
TCACGTCGTG AGATAGGTCA CGGTAACTTG GCACAACGCG CCCTCAAACG TATGATTCCT
GAGGATTGCC CATATACCGT GCGTGTAGTT TCTGAAATTT TGGAATCTAA CGGTTCATCT
TCAATGGCAA CTGTGTGTGC AGGTACTTTA GCCTTGATGG ATGCAGGGGT ACAAATGGTA
AAACCTGTAT CTGGTATTGC TATGGGGCTC ATCACCGATG GCGAGCGTTA TGCAGTACTT
TCGGACATTT TAGGTGATGA AGACCACCTT GGCGATATGG ACTTTAAGGT AACCGGTACT
GCCGATGGTA TTACCGCTTG CCAAATGGAT ATCAAAATAA AAGGTCTTTC TTACGAAATA
CTCGAAAAAG CTTTGAACCA AGCCCGCGAA GGACGTATGC ACATCTTGGG CAAAATCACT
GATACGATTG CAAAACCTAA CCCTACTGTG AAACCTCACG CGCCTAAAAT CGTTAAGATG
GATATGCCTA AGGAATACAT CGGGGCATTC ATCGGTACGG GTGGTAAGAA TATCCAAGAC
TTACAAGCGC GCACCAATAC TACTATCGTG GTAGAAGAAG TGGGCGAATT GGGCATCATA
GAAATCTTAG GTACTGACGA AGCAGGCATT CAAGAAGCTA TTGAGGCAGT AAATGCAGTG
AAATTTGAAC CTGTAGAAGG AGAAACTTAT ACTGTGAAAG TAGTGCGCTT AGTAGAGTTC
GGTGCTTTTG TAGAGTTTGT ACCTGGTAAA GATTCATTGC TCCACATCTC AGAAGTATCT
TGGGATAGAG TGGATAAAAT AGAAGACGCT CTTAAAGAAG GTGATATCAT AGAAGTGAAA
TACCTTGGTA TCGACCCTAA AACTAAGAAA ACAAGAGTAT CACGCAAAGC CTTGTTGCCA
CGTCCACCAC GTGAAGATCG TCCTAAGTCT GATAAGCCTT ACAACGGCAA ACCTCGTAAC
GACCGCAATA AAGGACACAA TAATCACCAA AAACCACGTC AAGAATAG
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| Protein sequence | MIPEVKKEII ELGDGRTITI ETGKLAKQAD GAVVVQMGNA MLLATVVSAK EINPETDFLP
LTVDYREKFA AAGRFPGGFF KRETRPSDQE ILTMRLVDRV LRPLFPKDYH AETQVMIQLI
SHDENVMPDA LAGLAASACL AVSDIPFDGP ISEVRVGRVN GQFIVNPSRE QLEASDIDIM
VGASKDFVAM VEGEMDEVSE KDMAEAIKFA HEAIKPHIEA QLRLAEKVGK TEKRTYEPEV
ENEEVKAKVY PLAYEKCYAI AKENTTKQER GEKFNAVKEE CLALFTEEEL EELTPIITRY
FDEAEKEAVR NLILNENIRL DGRNTTQIRP IWCEVGYLPS AHGSSIFTRG ETQSLTTVTL
GTSREANVID LPSEQGEERF YLHYNFPPFS TGEARPLRGT SRREIGHGNL AQRALKRMIP
EDCPYTVRVV SEILESNGSS SMATVCAGTL ALMDAGVQMV KPVSGIAMGL ITDGERYAVL
SDILGDEDHL GDMDFKVTGT ADGITACQMD IKIKGLSYEI LEKALNQARE GRMHILGKIT
DTIAKPNPTV KPHAPKIVKM DMPKEYIGAF IGTGGKNIQD LQARTNTTIV VEEVGELGII
EILGTDEAGI QEAIEAVNAV KFEPVEGETY TVKVVRLVEF GAFVEFVPGK DSLLHISEVS
WDRVDKIEDA LKEGDIIEVK YLGIDPKTKK TRVSRKALLP RPPREDRPKS DKPYNGKPRN
DRNKGHNNHQ KPRQE
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