| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1678 |
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| Symbol | |
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| ID | 8368124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2003902 |
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| End bp | 2006157 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984118 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003141784 |
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| Protein GI | 256820505 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0201195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAAA AATATATCTT TTTATTAGGG CTGTTGTTGC CCTTGTCGCT CTTTGCTCAA
AATTTTAGCA AAGGGTCTGT AATCGATGAA AACAAGACAC CACTTATAGG TGCTGATGTA
TATTGGGAAG GTACCCAAAT AGGGACTTCT ACTGATAACG AAGGAGCTTT TACCTTAAAA
CGACCTGAGG GAAGTTCTAC TTTAGTAGTA AGCTATGTAG GGTATAAAAA GAAAACTGTG
AAAGTAAGCG GTAACACACC TTTACACATT CAGTTAGAGC CCGAAACTAC TTTAGAAGAG
GTAGTAGTAA GCTACAAACG TGCTAATACA ATGAAATCGC AGTGGCAAGT TGCCGATGTT
CACACAATGA GCAGTGGGGA ACTGCTGAAA GCCGCTTGTT GCAACCTATC GGAGAGTTTT
TCTACCAATC CGTCGATTGA TGTGAACTTC TCGGACGCCG TTACGGGTAA CAAACAGATA
AAGATGTTAG GTTTGACTAG TCCGTACATA TTAATGGCAG AGGAGAATAT CCCTACGATG
CGCGGAGCTT CGCAAGCCTA CGGACTCTCG TTTGTGCCTG GTACGTGGAT TGAGAGTATC
CAGATTACCA AAGGAGCAGG GAGTGTGATT AACGGGTATG AAAGTATTTC GGGGCAAATC
AATTATGAAA TAGAGAAGCC TATCAATGCC ATTCCTTTTT TCTTGAACTT ATACGCATCG
GAGGATAACC GCTACGAAAT CAACGCCCAT ACCAATAAAA AGCTCTCTGA TAAATGGGCG
ACTACCCTCT TTGCTCACGG CAATGTGCGT CAGCAAAAAG CTGACCACAA TCACGATGGT
TTTATAGATA ACCCGATAGG TAACCAAATT AACTTGTTGA ATCGTTGGCA GTACGCCGAT
GCTCAAAAGG GTTGGGTAGG CTTTTTGAAC CTCCATTATA TGAAAGATGA GCGCCAGGCA
GGTGAATTGC GCTTTAATCC GCTGACTGAC AAAGGTACTA CCAATGCTTG GGGCAGTGAA
GTAAACTCCG AACGCCTCAG CGCATCTAAC AAAATAGGGT ATGTATTTCC TGATACGCCT
TATAAGAGCA TAGGCTTACA AAACTCTTTC CAATCGCACA AGCAGGATTC CTACTTTGGT
TTGAATCGCT ATGATATACA CCAAAAAAGT TGGTATGGCA ACTTGATATA CAACTCTATC
ATCACTAATA CCAAGCACAA GTTTGCCACA GGACTCAATG GTACTTACGA CGATTACAAC
GAGATGCTTA GTACTAGGGC TCTCACAGAG GATTTTTCAC GTGTAGACCG CTCGGTGGGT
GCCTTCTTTG AATACACTTA CGACAATTTA AGCAACTTCA GTTTTGTAGC AGGGGTACGC
GCCGACAGTC ATAATCACTT AGGAAATTTT ATCACTCCAC GCTTGCACGT GCGTTACAAT
CCTTGGAAGC AAGCTACTTT TAGAGTATCG GCAGGACGAG GTAAACGAGC TGCCAATGTG
ATTGCTGAGA ACCAACAGCT CTTGGCTTCT GCTCGAGAGT TTACTATCGT AGGAGGTGAT
GGTGGTAAGC TCTACGGTTT GAACCCTGAA ATCGCTTGGA ATTACGGCGT GAGCTTTTTG
CAAGCGTTTA AAGTATTGGG CAAGAACGCT GAGTTCTCCA TAGACTTCTA CCGCACTGAT
TTTGACAATC AAGTAGTAGT AGATTTGGAT AACTCACCCC AACAAGCCTT GTTTTATAAC
CTGAATGGTA ATAGCTTTGC TAACTCTTTA CAAGCTGAGT TTAGCATCAC ACCTGCCAAA
GGTTTGGACT TTAAAGCAGC CTACAAGTAT TACGATGTGC AAACACAGTT TACCAAAGGA
CAATTGGAGA AGACCCTTAC CCCAAAACAC CGTTGGTTTG CCAATGTAGC TTACGAGACT
CCTGAGCGTC ACGAGAACAA CCATTCGCAA TGGAAGTTTG ATGTAACCTT CAATTGGTTA
GGAGAACAAC GCTTACCTAC TACGGCTACG AACCCAGTGG CTTATAGACT TAGCGATTAC
GCTCCCTCAT TTGCTACACT CAATGCCCAA ATCACCAAAG TATTCTCTAA GACTTTTGAG
ATATATGTAG GCGGTGAAAA TATCACCAAT TATAAGCAAG AAAACGGAAT TTTGGCTGCC
AACGACCCTT TTGGTGCGTA TTTTGATAGT ACTATGCAGT ACGCTCCTGC TTTCGGACAG
ATGTATTACG CAGGACTAAG ATTTAAAATT CTATAA
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| Protein sequence | MYKKYIFLLG LLLPLSLFAQ NFSKGSVIDE NKTPLIGADV YWEGTQIGTS TDNEGAFTLK
RPEGSSTLVV SYVGYKKKTV KVSGNTPLHI QLEPETTLEE VVVSYKRANT MKSQWQVADV
HTMSSGELLK AACCNLSESF STNPSIDVNF SDAVTGNKQI KMLGLTSPYI LMAEENIPTM
RGASQAYGLS FVPGTWIESI QITKGAGSVI NGYESISGQI NYEIEKPINA IPFFLNLYAS
EDNRYEINAH TNKKLSDKWA TTLFAHGNVR QQKADHNHDG FIDNPIGNQI NLLNRWQYAD
AQKGWVGFLN LHYMKDERQA GELRFNPLTD KGTTNAWGSE VNSERLSASN KIGYVFPDTP
YKSIGLQNSF QSHKQDSYFG LNRYDIHQKS WYGNLIYNSI ITNTKHKFAT GLNGTYDDYN
EMLSTRALTE DFSRVDRSVG AFFEYTYDNL SNFSFVAGVR ADSHNHLGNF ITPRLHVRYN
PWKQATFRVS AGRGKRAANV IAENQQLLAS AREFTIVGGD GGKLYGLNPE IAWNYGVSFL
QAFKVLGKNA EFSIDFYRTD FDNQVVVDLD NSPQQALFYN LNGNSFANSL QAEFSITPAK
GLDFKAAYKY YDVQTQFTKG QLEKTLTPKH RWFANVAYET PERHENNHSQ WKFDVTFNWL
GEQRLPTTAT NPVAYRLSDY APSFATLNAQ ITKVFSKTFE IYVGGENITN YKQENGILAA
NDPFGAYFDS TMQYAPAFGQ MYYAGLRFKI L
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