Gene Coch_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1649 
Symbol 
ID8368095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1974256 
End bp1975830 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content44% 
IMG OID644984089 
ProductNa+/H+ antiporter 
Protein accessionYP_003141755 
Protein GI256820476 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCAAT ACTTCCCTTA CTTATTACTT TTGATGGTGG CTATTATGCT GCTTATAATG 
CTGGCTAACC GACTTAAAGT GGCATATCCT ATTCTTTTGG TGTTAGGAGG ATTGGCAATT
AGCTTTATTC CCAATGTCCC AACCATTACA CTGAATCCTG ATTTGGTGCT CATCATCTTC
CTGCCTCCAC TCTTATATGC TGATGTTTTT TCGCTATCAC TGAAAGAGAT GTGGAAGTGG
CGCCGCATTA TCTTTAGCTT TGCCTTTATT GTAGTTTTTA TTACGGCTGC TGCGGTGGCG
TGGGTAGCCA ATATGGTATT CCCTGGGTTT TCATTGGCGT TAGGTTTCCT TTTGGGGGGC
GTGATAGGCT CTACCGATGC CGTGAGTGCT TCCTCGATAA TGAAGTTTGT AAAGGTACCC
AAACGCATTT CAACCATCAT AGAGAGTGAA AGTTTGCTCA ACGATGCTTC ATCCCTGATT
GTATTTAGGT TTGCCGCTTT GGTAGTTACT ACCGGTCAGC TGGTGTGGAC GGATATGGCT
TTGAATTTCC TTTGGGTAGT TATTGGGGGA ACGCTTATAG GCTTGGCAGT AGCGTGGGTG
ATGCGCAAGC TACACAGATT CCTCCCTACC GATGCTAATA TGGATATTAT CCTTACCCTT
ATTGCTCCTT ATATAATGTA TATTGTAGCT AACGAGGTAG GGGCGTCCGG AGTGTTGGCA
GTAGTGGCTG GGGGTATGTA TATGTCGTTC CACCTTACTA GTATTCTTGC TGCCTCCACA
CGCAACAAAG GGGTGGCGGT ATGGGATATT TTAGGTTTTG TGCTCAACGG ACTTGCCTTT
ATGCTGATAG GACTTGCTTT GCCTGAAGTG CTGATAGGTA TAGAAGCCGA AGGTATGAGT
CTTGCCACTG CTACCAACTA CGGACTGCTC ATCACAGGGG TAGTAGTAGG GGTACGACTG
CTATCATCTT ATGGAGCTAT ACTCATTACT CAAGTAATGA AACACTTCAT AACAGTAGCC
GACAGGCGGA ACCCTGGCTT TCGGGTACCT TTGGTACTAG GGTGGGCAGG AATGCGCGGG
GTGCTTTCAC TTGCCGTAGC ACTTTCTATC CCTCTTACCT TAGAGAATGG CGAGCCTTTT
CCGCATCGCA ACCTCATTCT CTACATTACT TTTATAGTGA TATTGGTAAC TCTACTCGTG
CAAGGGCTTA GCTTGCCAGC ACTTATCCGT TGGGCTAAAT TCCCTGATTA TGAAGACCAT
ATTCCTGAAG CTGAAGCTGA GAGCCTTATT AGGAAATCAT TAGCACAAGC GGCTTTGGAT
TATATGCAAG AGCATTACAA AGAAGGAATT ACTGATAGTT TTTTGTTACA GAATCAAAAA
GATATATGGC AATACCAACT CGATTTGCCT AAGAGCAATA CTACCCCCGA AGTGCGAAAG
AAATACATCG CTATTTTGCA TCATCAGCGG GAAATATTGC ACCAACTGAA TAAGAATCCA
CGTATTGATG AAGAACAAAT ACGCAATTTC CACCGACAGT TGAATTTAGA AGAAGAAAAA
TGGGAGATGA ATTAG
 
Protein sequence
MVQYFPYLLL LMVAIMLLIM LANRLKVAYP ILLVLGGLAI SFIPNVPTIT LNPDLVLIIF 
LPPLLYADVF SLSLKEMWKW RRIIFSFAFI VVFITAAAVA WVANMVFPGF SLALGFLLGG
VIGSTDAVSA SSIMKFVKVP KRISTIIESE SLLNDASSLI VFRFAALVVT TGQLVWTDMA
LNFLWVVIGG TLIGLAVAWV MRKLHRFLPT DANMDIILTL IAPYIMYIVA NEVGASGVLA
VVAGGMYMSF HLTSILAAST RNKGVAVWDI LGFVLNGLAF MLIGLALPEV LIGIEAEGMS
LATATNYGLL ITGVVVGVRL LSSYGAILIT QVMKHFITVA DRRNPGFRVP LVLGWAGMRG
VLSLAVALSI PLTLENGEPF PHRNLILYIT FIVILVTLLV QGLSLPALIR WAKFPDYEDH
IPEAEAESLI RKSLAQAALD YMQEHYKEGI TDSFLLQNQK DIWQYQLDLP KSNTTPEVRK
KYIAILHHQR EILHQLNKNP RIDEEQIRNF HRQLNLEEEK WEMN