Gene Coch_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1638 
Symbol 
ID8368084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1958690 
End bp1959304 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content44% 
IMG OID644984078 
ProductHhH-GPD family protein 
Protein accessionYP_003141744 
Protein GI256820465 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAA AAATCAAAGT TTTTAATAAA TTATTAGCCC ATTACGGCAA GCAATATTGG 
TGGACTGACC CCAATCGCAT TACCGACTGG ATTTCGATGA TTCTCATTCA GCAAACGACC 
CAACAGAATA CCGAAAAAGC CCTTGCTAAC TTAGAGGGTA ACTTATCGGT AGAGGCTTTA 
CACGCTATGG AACTGAACAC TTTACAGGAA TATATACGTC CGGCAGGCTT CTACAAGCAA 
AAAAGCACTT ACATCAAAGC CCTAATGGAA TGGTATGTGT CGCACGGAGC TTCCTTACAA 
AAGTTTGAAG CTATCCCTAC TGAGGAACTT CGCAAGGAAC TGCTCTCTAT CAAAGGTGTG 
GGCGAAGAAA CTGCCGATGC TATGTTGTTG TACATCTTTG AGCGAAAGGT ATTCATAGCC 
GACCAGTACG CTATACGACT TTTGAACCGC CTGAACCTCT CTTCAGCACA GACTTACAAA 
GCCCTCCGCG AAGAGTGTAT GCCCTTAGTT GCTGAAATTC CCTTAGAAAC CTGCCAAGAA 
TGGCACGCTG TGATTGATGT GCACGGCAAG GCTTACCGCA AAGGTTTTAC CGATGAACAG 
TGGTTATTAG AATAA
 
Protein sequence
MSQKIKVFNK LLAHYGKQYW WTDPNRITDW ISMILIQQTT QQNTEKALAN LEGNLSVEAL 
HAMELNTLQE YIRPAGFYKQ KSTYIKALME WYVSHGASLQ KFEAIPTEEL RKELLSIKGV 
GEETADAMLL YIFERKVFIA DQYAIRLLNR LNLSSAQTYK ALREECMPLV AEIPLETCQE 
WHAVIDVHGK AYRKGFTDEQ WLLE