| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1619 |
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| Symbol | |
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| ID | 8368065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1933785 |
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| End bp | 1934594 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644984059 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_003141725 |
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| Protein GI | 256820446 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0981488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATCAT CACAAGATGA AATGTCCTTT TTAGACCATT TGGAAGCCTT GCGCTGGCAC
TTGATACGTG CTATTATAGC TGTTTTAGCA GTGGGTGTGG TAGCGTTTGT GTGTAAGGAT
TTTATTTTCC AAATCATCTT TGCTCCTAAG AATGGCGATT TCTTTACTTA CAGAATGTTC
TGTAAGATAG GTCATCTTTT TGGATTTAAA AGTACTTTTT GTGCTGAACA ATTGCCTTTT
ACAATTCAAA GCCGTACAAT GGCAGGGCAG TTTTCAGCTC ATATCTGGAC GTCTATTTGG
GCAGGAGTGA TTCTCGCATT TCCTTATGTG CTTTATGAAG TGTGGAAATT CATCAGTCCA
GCACTTTATG AAAACGAGCG CAAGCTGGCT CGTGGCTTTA TTCTCATTGC TTCTTTGCTG
TTTTTTATAG GAGTTTTGTT TGGCTATTAT CTCATCACCC CACTATCAGT GAATTTCTTA
GGGTCTTATT CAGTAAGTCC CGAAGTGAGA AACCAAATAG ATTTAAACTC TTATATTTCG
GTAGTACGCT CGTCAGTCAT TTCGTGTGGC ATTATTTTTG AGCTACCTAT TGTTGTTTAT
TTTCTTACCA AATTAGGAGT GATAACACCT GCTTTTATGC GAAAATATCG CCGGCACGCA
GTCATTGTAG TGCTTATCAT TGCAGCAATT ATAACCCCTC CTGATGTAGT AAGCCAAATT
ATCGTGTCGA TACCGATAAT GCTCTTATAC GAAATAAGTA TTTTTATTTC AGCTTACGTT
TTAAAAAAAG AACAAAACAA GGTAATTTAA
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| Protein sequence | MESSQDEMSF LDHLEALRWH LIRAIIAVLA VGVVAFVCKD FIFQIIFAPK NGDFFTYRMF
CKIGHLFGFK STFCAEQLPF TIQSRTMAGQ FSAHIWTSIW AGVILAFPYV LYEVWKFISP
ALYENERKLA RGFILIASLL FFIGVLFGYY LITPLSVNFL GSYSVSPEVR NQIDLNSYIS
VVRSSVISCG IIFELPIVVY FLTKLGVITP AFMRKYRRHA VIVVLIIAAI ITPPDVVSQI
IVSIPIMLLY EISIFISAYV LKKEQNKVI
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