Gene Coch_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1594 
Symbol 
ID8368039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1901939 
End bp1903621 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content42% 
IMG OID644984033 
ProductOstA family protein 
Protein accessionYP_003141700 
Protein GI256820421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CGTATTACTA TATATTATTC ACTTGTTTAT TAACCTTTTG TACTAACCTT 
TGGGCTCAGA ATGACAATAG CAAGACCCGC CGTATCGAAA TTATCTACGG GGGGGAATTT
ACAATTGACA ATGAGAAATA CCCTGGGGCT ACTATCTTTA AATCGGACGG ACAACGGGTA
CAGTTTCGAC ATCAAGGATT AGACGTGTGG TGCGATTTGG CTGTGCTCTA CGAGGAGAAA
AACGAGGTGA TTGCACACGG CAATGTAGTG CTACAACAAG GCGACACGCT ACAAATGAAC
AGTCAGTACG TATCGTATAA AGGGAATACT AAAACAGCTG TAGCCCGCGA GAACGTGCTA
TTGCGCAATG GGAATATGAC GCTGGAAACC CAAGAACTCT TCTTCGACCG CAACTCTCAG
GAGGCTTATT ACAACAATTT CGGAAAAATT ACTGACCCTG AAAATGAGCT CACCAGTAAA
ACAGGAAAGT ATTACGTAAC GACCAAGAAA AACCAATTTA CCAATTCGGT AAAGATTGTC
AATAGAGATT TTACGGTTAA TTCGCAGGTG TTGGACTATT ATCACAATTC GGGCAACGCC
TATTTTTACG GCAAAACTAC CATTGTGGGC GCTGATTACA AAGTGTATTG CGAGCGAGGT
TTTTACGATA CGCGTCGACA ATTGGGTTAT TTTATGAAGC ACGCCAAGAT AGAATACGAC
CTGAAAACCT TGGTGGGCGA CAGTTTGTAT TTTGATAAAC GCCGTCAGTT TTCTTCGGGT
TCTAACAATA TCTTCATTTC GGACACGGTA AACAAGACCT TTGTACGAGG GCATTACGGC
GAAATTCACA AGGCAAAAGA TTCGATGTTT ATCACCAAAA AGGCAGTGGT AATCACATTA
GTGGAGAAAG ACTCGATGTA TATGCACGGC AAGCGCATTT TGGTTACTGG CAAACCGCAA
CACCGCGTGA TTCGCGCTTA CCCCGATGCT CGTATTTTCA AAAGTGATAT GCAAGCCAAG
TGCGATTCAA TTCACTCTGA CGAGGCTAAT GGGCTGACCC AAATGGTGGG CAAACCTGTA
GCGTGGACAG GCGAAAGCCA AATGACGGGT GACAATATTC ACCTGATTGC CAATACGAAG
ACCGAGCAAC TGGACTCTTT AAAAGTGTTT AACAACGCAC TGGTGGTAGA GAAAGACAGT
TTGGGCGATG GCTATAACCA AGTGAAAGGT AAGTTCTTGT ATGGCAAATT CAAGAAAAAT
GTTTTGCGAC AAATAGACTT TTTGCAGAAT ACCGAGTCTA TTTATTACGT GTATAACGAC
GCTAAGGAGC TGGTAGGTAT CAACAAACTG ACTTGTAGTC ATATTAAGCT CTATTTAAAC
AAAGACCAGC AAATACAACA AACGGTGTTT ATTACACAAC CATCGGGGAA TTTATACCCA
GACGATAAAT TACACGTGAA CGACCGTAAG TTTAAGGAAT TTATATGGCG AGGTGATGAA
CGTATCCGCA GTAAAGAAGA GATTTTTAGC GATGCGGAGA AGAAAATAAA ACCCAAGAAA
ATTAAGGGAA TGAAGACTCC TGAGGAGATA GACGAGGAGG AAAATCTGCT TGCAAATCCG
TCGCTTAAAA AAGAGAATAA GGCGGGAAAA GAGAAGGCTA AAGAGAAGCC AAAAAACAAA
TAA
 
Protein sequence
MKKTYYYILF TCLLTFCTNL WAQNDNSKTR RIEIIYGGEF TIDNEKYPGA TIFKSDGQRV 
QFRHQGLDVW CDLAVLYEEK NEVIAHGNVV LQQGDTLQMN SQYVSYKGNT KTAVARENVL
LRNGNMTLET QELFFDRNSQ EAYYNNFGKI TDPENELTSK TGKYYVTTKK NQFTNSVKIV
NRDFTVNSQV LDYYHNSGNA YFYGKTTIVG ADYKVYCERG FYDTRRQLGY FMKHAKIEYD
LKTLVGDSLY FDKRRQFSSG SNNIFISDTV NKTFVRGHYG EIHKAKDSMF ITKKAVVITL
VEKDSMYMHG KRILVTGKPQ HRVIRAYPDA RIFKSDMQAK CDSIHSDEAN GLTQMVGKPV
AWTGESQMTG DNIHLIANTK TEQLDSLKVF NNALVVEKDS LGDGYNQVKG KFLYGKFKKN
VLRQIDFLQN TESIYYVYND AKELVGINKL TCSHIKLYLN KDQQIQQTVF ITQPSGNLYP
DDKLHVNDRK FKEFIWRGDE RIRSKEEIFS DAEKKIKPKK IKGMKTPEEI DEEENLLANP
SLKKENKAGK EKAKEKPKNK