Gene Coch_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1580 
Symbol 
ID8368025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1884968 
End bp1885573 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content40% 
IMG OID644984019 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_003141686 
Protein GI256820407 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.12737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCG TTTACAAACT AAAACCTAAA TTTCAGCAGT TGCTACACCC TATCTTGCTG 
TTCTTGCATC GTAAGAAAGT AACTGCAAAC CAAATAACGA TAGTTGCTAT TTTGTTTTCT 
TTAATAATTG GAGTGCTCTT TTGGCAAGCC TCTGAATGTC GTTACTTCTT CTTAGCCTTA 
CCTATAGGCT TACTCTTGCG TATGATTCTC AATGCACTCG ACGGAATGAT GGCTCGCGAG 
TTCCAGCAAA CCACTTCTTT AGGTGAAATC CTCAACGAAT TGGGTGATGT GATTTCCGAT 
GTGTTCATCT TCTTCCCTTT GCTGAAATAT CACCCCGAAA GCCTTTATTT AGTAGTTATT 
TTTATTGTGT TCAGCGTTCT CAATGAATTT GCCGGCGTAA TGGGCAAAGT GTTAGGCGGT 
GAAAGACGCT ATGAAGGACC TATGGGTAAA AGCGACCGTG CCTTACTAAT AGGCATTTAC 
GGACTTTTAG CTTTCTTGGG CGTTTCTATC ACTTCTTACT CAGCGATTAT CTTCGGGATT 
ATAATTGCTT TACTGTCCCT CAGCACCTTT ATTCGTCTCA AAAAAGGACT TTATGCCCAA 
CACTAA
 
Protein sequence
MISVYKLKPK FQQLLHPILL FLHRKKVTAN QITIVAILFS LIIGVLFWQA SECRYFFLAL 
PIGLLLRMIL NALDGMMARE FQQTTSLGEI LNELGDVISD VFIFFPLLKY HPESLYLVVI 
FIVFSVLNEF AGVMGKVLGG ERRYEGPMGK SDRALLIGIY GLLAFLGVSI TSYSAIIFGI 
IIALLSLSTF IRLKKGLYAQ H