| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1560 |
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| Symbol | |
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| ID | 8368004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1855032 |
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| End bp | 1857752 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983999 |
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| Product | hypothetical protein |
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| Protein accession | YP_003141666 |
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| Protein GI | 256820387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.40079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTACATT ATAAACGTCA ACTCACTTTC ATTATCAGCT TATTAGTGGT AAGCTCCTGT
CTTTGGTATG CGGAATCATT CGCCTTTAAG TCGGGTGGTT TTCACTATAC AACTCCGTGG
GCAGTGCGCG ATACTATCAA AAAAGATACA GTAGAGCCTA AAAACGACCG CCGTGGGCGA
CGTATTAAGC CTAAGAAACC TTCGGAAAAA GCTAAAGATT CCCTTAAAAA CGATACGATT
AAAAAACCTA AGAATGCCTT GGAAGACATC GTGAAATACA AGGCTAAGGA CAGTATTGTG
TTCAACAAGG TGAAGAACGA AATCATTTTG TACAACGAAA CTAATGTGCA ATATACTGAT
ATTGACATCA CTGCGGGAAT AGACGTGATT AACTATGAGA AAGGCGAAGT GTATGCCGGA
CGCCTAAAAG ACAGCGTGGG AGAATATACC CAACACCCTG TATTTAAGCA AGGTAGTGAT
GTAATAGAGC CCGATTCGAT ACGTTTTAAT TACCGCAACC AGAAGGCGAT TATCCGCAAT
GCTTATACCA AGCAGGACGA AAACAACATA AAAGGCGAAA TCATTAAGAA AGAAAATGAC
TCTACTTACT TTATGAGAAA CGCGATTATT ACTACTGCCG AAGACCTCGA CGACCCTGAT
TATTACATCA GAGTGCGCAA AGCGAAGTTC GTGCCTAAAA AGAAGGTTAT TGCAGGGTTT
AGCAATATGT ATATCGTGGA TATTCCTACG CCTTTGGCTA TTCCGTTTGC TTATTACCCT
ATGGTATCGG GACGCACTTC GGGGCTTATC TTCCCTACCT TTGGTGAGGT GAATAACCGT
GGTTATTTCT TACAGAACAT AGGTTATTAC TTTGTAATTA GCGACAATTT TGACCTTTCG
CTTACGGGTG ACTATTATAC CAATGGTAGC TATGGACTTA GGGCACAATC GGCTTATGTG
AAGCGCTACA AGTATTCAGG GAACTTCAAT CTTTCATTTG AGAATAACAT ATACAGTATG
AAGGGCTTAC CTGACTATTC AGGTAGCCGT ATGTACAATA TCCAGTGGTC GCATTCCAAA
GACGGTAAAG CCAACCCTAA TTCTAACTTT TCGGCTTCGG TGAACCTATC GAGCAACAGT
AGATATTACC AAGAATCCTA CAATCAAGCG AACACGTCGA ACTTTTTGAA CAACACGATG
ATGTCGTCTA TCTCGTACTC CAAGACGTTC CCAGCGTATC CTTCGATTAA CTTATCGCTA
TCGGCATCGC ATTCACAAAA TACAAATACC AAAAGTATTG ATATGACACT TCCCTCGATG
CGTGCGAGTA TGGAGCGCAT TTACCCTTTT GCTCGTGAAG GACAAACGAA GAAAGGACTT
ATCAAGAGTT TGAATTTTCA GTACAGTATG CAAGCTGATA ACCGTTTTTC GACCTATGAC
AGTTTGTTCT TTACTAAAAA GATGTTTGAC GAGGCGAGAA ACGGGGTGCG ACACTCTATA
CCGGTGAGTA CAACTGCTAA GCTATTTAAA TACGTTACCT TAGGGTTGAA CTCATCAGTA
AACGAGACGT GGCAATTTAG GACAATTCGC CGTAAGGACT TCAATAGCAA TACGGGCAAG
GTAGGCATTG ACACCCTCAG TGGTTTTGAC CGTTTTATGA CGTACAACCT CGGGGCGAGT
CTCGGTACGA CTATTTACGG TACTTTCCGT TTTGGCAAGA ATGCTAAAAT ACAAGCTATT
CGCCACGTGA TGCGACCCTC GGTGAGTTAT GGTTATAATC CTTCTTTTGA CCAGTATTAC
GATTATTACA TTTCGGACGC TTATGGCAAC CGCTCACAAT ACACTCGTTT TGAGGGTGGT
ATCTACGGTA CGCCAAGTTT GGGTGAGTCG CAATCGATAG GGTTCTCATT GGCAAACACC
TTTGAAGCCA AAGTGAAACA AAAAGATAGC ACTGATGCTG AGCCGAAAAA GGTAATGCTC
TTGAATAGTC TCAATTTCAG TTCTAACTAC AACGTGATTA CCAAGCAATT TAGTCCGCTG
AACATTACGG GGGGTACTTC GTTCTTCAAC GGGAAGCTCG GGGTGAACTT TGGGGCGACA
CTCAACCCTT ATGCAATAGA CAACAACGGA CGACAAATGG AGAAATGGAA TATAGACAAC
GGCGGTAGTC TTTTTAGGCT TACTAACGCC AATATTTCTA CCAACTATTC ATTCTCGAAC
AAAGATAAAA AAGACAAGAA TAAAGACAAA CAGACGGGTA ACGTAGCGGG AGGACGTACT
GATGACCTCT TTGGGTCGTC GAAACCACTA AGCGAAGTGC AGGATATGGA TAAAAACCGC
AAAGAAGGCG AGGATAAAGA TGAGAAGAAG ACCTTTTACA AGGCAGTTAT CCCTTGGGAC
ATAACCTTAG CACATTCGCT TACTTATAGC AATCAGGCAC GCGAAAATAA GATATCCAAC
AACTCGCTAA TGTTCTCAGG TAACGTATCG CTCACGCCCA AATGGCAGGT AGGAGTTTCG
AGCGGTTATG ACTTTGTAAA CCAAGGATTC ACCTATACCC AATTACGTTT TGAGCGCGAT
TTGAGCAGTT TCCGTATGAG TTTTCAGTTC ACTCCGTTCG GTTATCGCAG TTCGTGGTAT
TTCTTTATCG GCATCAAAGC CTCAATGCTT TCAGACCTAA AATGGGAGAA GAACAAAGAG
CCGGATAGGG TCTTAAGGTA A
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| Protein sequence | MLHYKRQLTF IISLLVVSSC LWYAESFAFK SGGFHYTTPW AVRDTIKKDT VEPKNDRRGR
RIKPKKPSEK AKDSLKNDTI KKPKNALEDI VKYKAKDSIV FNKVKNEIIL YNETNVQYTD
IDITAGIDVI NYEKGEVYAG RLKDSVGEYT QHPVFKQGSD VIEPDSIRFN YRNQKAIIRN
AYTKQDENNI KGEIIKKEND STYFMRNAII TTAEDLDDPD YYIRVRKAKF VPKKKVIAGF
SNMYIVDIPT PLAIPFAYYP MVSGRTSGLI FPTFGEVNNR GYFLQNIGYY FVISDNFDLS
LTGDYYTNGS YGLRAQSAYV KRYKYSGNFN LSFENNIYSM KGLPDYSGSR MYNIQWSHSK
DGKANPNSNF SASVNLSSNS RYYQESYNQA NTSNFLNNTM MSSISYSKTF PAYPSINLSL
SASHSQNTNT KSIDMTLPSM RASMERIYPF AREGQTKKGL IKSLNFQYSM QADNRFSTYD
SLFFTKKMFD EARNGVRHSI PVSTTAKLFK YVTLGLNSSV NETWQFRTIR RKDFNSNTGK
VGIDTLSGFD RFMTYNLGAS LGTTIYGTFR FGKNAKIQAI RHVMRPSVSY GYNPSFDQYY
DYYISDAYGN RSQYTRFEGG IYGTPSLGES QSIGFSLANT FEAKVKQKDS TDAEPKKVML
LNSLNFSSNY NVITKQFSPL NITGGTSFFN GKLGVNFGAT LNPYAIDNNG RQMEKWNIDN
GGSLFRLTNA NISTNYSFSN KDKKDKNKDK QTGNVAGGRT DDLFGSSKPL SEVQDMDKNR
KEGEDKDEKK TFYKAVIPWD ITLAHSLTYS NQARENKISN NSLMFSGNVS LTPKWQVGVS
SGYDFVNQGF TYTQLRFERD LSSFRMSFQF TPFGYRSSWY FFIGIKASML SDLKWEKNKE
PDRVLR
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