| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1559 |
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| Symbol | |
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| ID | 8368003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1853004 |
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| End bp | 1854992 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983998 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003141665 |
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| Protein GI | 256820386 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0638727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA AGATACAACA ACTTCGGGAG GAACTCAATG AGCACAATTA TAACTACTAT
GTGCTGGACA ATCCTACGAT TTCGGATTAT GAGTTCGACC AAAAGCTTAA AGAACTACAA
GCCTTAGAGC AAGCATACCC AGAGTTTTAC GATGAGAATT CGCCTACTGT ACGCGTGGGA
GGTTCTGTTA CTAAAAGTTT TCCAACCGTA ATACACGAAT ACCGTATGTA CTCGTTAGAT
AACTCTTATT CTAAGGAAGA CTTAGAGGAA TGGGAACAGC GTATTATCAA GACGTTGGGC
AGTGACCAAA TTAACTTTAC TTGCGAACTG AAATACGACG GTGCTTCTAT AGATTTGTTG
TACGAAAATG GCAAGCTTAA ACAAGCTACT ACTCGTGGTG ATGGTATTCA AGGTGACGAT
ATTACCGCCA ATGTGCGTAC GATTCGTTCA GTACCCTTGC AACTAAAAGG CGATTATCCT
GAACGTTTTT ACATTCGCGG GGAGATAGTA ATGCCTAAAA AAGCCTTTGA AAGCCTTAAT
AAGGAACGTA CAGCAGCTGG CGAAGACCCT TTTATGAACC CTCGTAACAC CGCCAGCGGT
AGTCTCAAAT TGCAAGATAC TGCCGAGGTT GCTAAACGAG GTTTAGATTG CTTGTTGTAC
TTTTTGGTAG GGAACACAGG TATAAAGAGT CAGTTTGAGA GTTTAGAAAA AGCGCGCGAA
TGGGGCTTTA AAGTACCTAA TATTTCCAAA TTGTGCCATT CTACTGCCGA AGTAATGGAC
TTTATCAACG AATGGGATAC CAAACGCCAC ACTTTGCCTT ATGAAACTGA TGGAGTAGTG
GTAAAGGTAG ATAGTATTGC CCAGCAAGAA GAGTTGGGGT ATACTTCAAA ATCGCCGCGT
TGGGCAATGG CTTACAAGTT CAAAGCAGAA CAAGTAGACA CTGTTTTAGA GAGTATTTCC
TACCAAGTGG GACGTACAGG AGCTATTACT CCGGTGGCAA ATCTCAAACC CGTGTTACTA
GCGGGAACGG TAGTAAAACG TGCTTCATTG CATAATGCTG ACCAGATTGA AAAGCTCGAT
ATTCGCATAG GCGACTCGGT ATATGTAGAA AAAGGCGGGG AGATTATCCC TAAAATTGTA
GGCGTGAACT TAGATAAGCG CGAAGCAGAT GCTCAGCCCG TGAAATATAT CACCCATTGT
CCTGAATGTG GTACCGAATT GGTGCGCAAC GAAGGCGAAG CGCAACACTA CTGTCCTAAT
GCTTATGGCT GTCCGCCCCA GATTACAGGT AAGATTCAAC ATTTTATCTC ACGCAAAGCA
ATGGATATAG AAGGCTTAGG TGAAGAGACA GTAGAACAAC TCTTCCGTGC CGGTATTATC
CATACTTATG CTGACCTCTA CGAGGTAACC GTAGAGAAAT TGCTCCCCTT AGAGCGTATG
GCACAAAAGA GTGCTGAGAA TATTGTTAAA GGTATTCAGA AATCAAAAGA AATACCTTTT
GAACGCGTGC TTTTTGCTTT GGGGATTAGG TATGTAGGTG AGACTGTTGC CAAGAAGCTG
GCACGCCACT ACAAAACGAT TGAAGCCCTA GAAAATGCCA CTATCGAACA GTTGGTGGAA
GTAGATGAAA TAGGGAACCA AATAGCCAGC AGTATAGTAA ACTTCTTCGC TGATGACTAC
AACCGTCAAC TCATCGATAG GCTCAAAGGC TATGGTTTGC AGTTTTCAAT TAATGAACAA
GCTACCGAAG GTCAAACTGA TACCCTCAAA GGGCTTACCT TTGTGGTTTC TGGGGTCTTT
CACTTGTATT CACGGGAGGA ACTCAAAGCC CTTATTGAAC AACACGGAGG TAAAGTAGGG
TCATCTATCT CTTCTAAAAC TAATTACGTG ATAGTAGGCG ATAATATGGG ACCAAGTAAG
AAAGAAAAAG CCGAGCAATT AGGTGTGAAG ATGATTAGTG AAGAAGAATT TAATGCAATG
ATTTTGTAA
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| Protein sequence | MKEKIQQLRE ELNEHNYNYY VLDNPTISDY EFDQKLKELQ ALEQAYPEFY DENSPTVRVG
GSVTKSFPTV IHEYRMYSLD NSYSKEDLEE WEQRIIKTLG SDQINFTCEL KYDGASIDLL
YENGKLKQAT TRGDGIQGDD ITANVRTIRS VPLQLKGDYP ERFYIRGEIV MPKKAFESLN
KERTAAGEDP FMNPRNTASG SLKLQDTAEV AKRGLDCLLY FLVGNTGIKS QFESLEKARE
WGFKVPNISK LCHSTAEVMD FINEWDTKRH TLPYETDGVV VKVDSIAQQE ELGYTSKSPR
WAMAYKFKAE QVDTVLESIS YQVGRTGAIT PVANLKPVLL AGTVVKRASL HNADQIEKLD
IRIGDSVYVE KGGEIIPKIV GVNLDKREAD AQPVKYITHC PECGTELVRN EGEAQHYCPN
AYGCPPQITG KIQHFISRKA MDIEGLGEET VEQLFRAGII HTYADLYEVT VEKLLPLERM
AQKSAENIVK GIQKSKEIPF ERVLFALGIR YVGETVAKKL ARHYKTIEAL ENATIEQLVE
VDEIGNQIAS SIVNFFADDY NRQLIDRLKG YGLQFSINEQ ATEGQTDTLK GLTFVVSGVF
HLYSREELKA LIEQHGGKVG SSISSKTNYV IVGDNMGPSK KEKAEQLGVK MISEEEFNAM
IL
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