| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1553 |
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| Symbol | |
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| ID | 8367997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1845836 |
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| End bp | 1846573 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983992 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_003141659 |
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| Protein GI | 256820380 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00323252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACACA TTGCAGCCGT AGGAGGCTAT TTTATAATGC TTTATGATGT TTTTCGTAAA
CGTACCCGCT GGTCGATAAT GAAAGACCTT ATCTTGCGTG AGATAGACGA TTTAATATTT
GGGTCAATAG GTATCGTAAC TTTTATCTCT TTCTTTGTGG GAGGGGTAGT AGCAGTACAA
ACAGCCCTAA ATATCGATAA CCCTTTTATT CCTAAATATC TCATAGGTTT CGCCACTCGC
CAATCTATTG TATTGGAGTT TGCCCCCACC TTTACAGCTA TCATCTTGGC AGGAAAAATA
GGGTCGTTTA TCACTTCCAG TATAGGTACG ATGCGCGTAA CCGAACAGAT TGACGCTCTT
GATATTATGG GAGTAAACTC AGTGAATTAT TTAGTATTCC CAAAAATAGT AGCCCTAATG
TTAATGCCTT TTCTCATCGC CTTAGGTATG TACTTAGGAG TATTAGGAGG CTGGGCTTCA
GCGGTGATGA GTGGTTATAC CACCTCTGCC GAATTTGTGC AGGGAGTACA ATACGACTTC
AAACCTTACA GTATGATATA CGCTTTCACC AAAACGGTAG TATTTGCCTT CTTCTTGGCT
ACTATCCCGT CCTATCACGG CTATTATATG AAAGGGGGTG CACTGGACGT TGGGAAAGCG
AGTACCGTTT CGTTTGTATG GACAAGTATA GTGATTATCC TTTCTAACTC GGTACTCACA
CAGTTGTTCT ACGCTTAA
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| Protein sequence | MKHIAAVGGY FIMLYDVFRK RTRWSIMKDL ILREIDDLIF GSIGIVTFIS FFVGGVVAVQ
TALNIDNPFI PKYLIGFATR QSIVLEFAPT FTAIILAGKI GSFITSSIGT MRVTEQIDAL
DIMGVNSVNY LVFPKIVALM LMPFLIALGM YLGVLGGWAS AVMSGYTTSA EFVQGVQYDF
KPYSMIYAFT KTVVFAFFLA TIPSYHGYYM KGGALDVGKA STVSFVWTSI VIILSNSVLT
QLFYA
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