| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1547 |
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| Symbol | |
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| ID | 8367991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1839831 |
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| End bp | 1841069 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983986 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_003141653 |
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| Protein GI | 256820374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.631705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGTC TTATTTTTAG TATAATGAAA TTACACAGAA ACTTAGTAGA TGCCGTAATA
GAGGGACTTA CCTTTATTTT TAACGAAGGG CAATACGCCG ATAAGGTAGT AGAAAAACAA
CTGAAAAAAG ACAAGCGTTG GGGCGCCCGC GATAGGGCTT TTATTGCCGA AACCATTTAC
GACATTGTCC GTTGGAAACG GCTTTATGCC GAGATTGCCG AAGTGTACGA ACCCTTTACA
GTGCACAACC TACGCCGTAT GTTTGCCGTG TGGGCGACTC TCAAAAGTAT AGCTTTGCCC
GATTGGGGAA ACTATTTTGA AGATACTCCT GCACGTCGTA TTAAAGGCAA GTTCGACGAA
CTCTCTAAGG TGAGAAAACT ACGTGAATCT GTACCCGACT GGTTAGATAC TTTGGGAGCA
CAAGAATTAG GAGAAACGTT GTGGACAGAT GAATTGCACG CCCTTAACAG TTTAGCTCCC
GTAGTATTGC GAGTGAATAC CCTTAAAACT TCTTTGGAAC ACTTGCAACA GTTTTTGCGA
CAAGAAGGAG TAGAAACTTA TCCTTTGCGC GATTACCCCG ATGCTTTGCA GTTAGTAGAA
CGCAGCAATA TCTTTAAAAC CCAAGCTTTT GCCGATGGAC TGTTTGAGGT ACAAGATGCT
TCCTCTCAAA AAGTAGCACC CTTTATGCAG ATAGACGACA AGGTGAAACG TGTAATCGAC
ACTTGTGCTG GAGCAGGAGG TAAAACCTTA CACCTCGCTA CCCTAATGCA AAACAAAGGT
CAGATTATAG CGATGGATAT CTACGAGCAG AAATTGCAAG AGCTCAAACG CAGGGCACGC
CGTAACGGGG TTTTTAACAT AGAAACTAAA CTCATAGAAC CCAAACAGCT CAAACGTATG
CACGGCACAT TCGACCGCGT ACTCATTGAT GCCCCTTGTA GCGGACTCGG CGTACTGCGC
CGTAACCCAG ATGCAAAATG GAAATTGCAA CCTGAATTCT TGGACGAAAT ACGCACTACT
CAACAAGAAA TTTTACAACA GTACAGTAAA TTGCTAAAAA AAGGAGGCAA ACTTGTCTAT
GCTACTTGTT CTATATTACC TTCTGAGAAT CATCAACAAG TACAGACGTT TTTAGCTTCG
GAAGTAGGAA AAGAGTATCG CTTAGAAGCT GAGGAAGTGA TTTTTGCCCA TCAATCGGGG
TATGATGGTT TCTATATGGC AAGACTTATT AATGATTAA
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| Protein sequence | MRRLIFSIMK LHRNLVDAVI EGLTFIFNEG QYADKVVEKQ LKKDKRWGAR DRAFIAETIY
DIVRWKRLYA EIAEVYEPFT VHNLRRMFAV WATLKSIALP DWGNYFEDTP ARRIKGKFDE
LSKVRKLRES VPDWLDTLGA QELGETLWTD ELHALNSLAP VVLRVNTLKT SLEHLQQFLR
QEGVETYPLR DYPDALQLVE RSNIFKTQAF ADGLFEVQDA SSQKVAPFMQ IDDKVKRVID
TCAGAGGKTL HLATLMQNKG QIIAMDIYEQ KLQELKRRAR RNGVFNIETK LIEPKQLKRM
HGTFDRVLID APCSGLGVLR RNPDAKWKLQ PEFLDEIRTT QQEILQQYSK LLKKGGKLVY
ATCSILPSEN HQQVQTFLAS EVGKEYRLEA EEVIFAHQSG YDGFYMARLI ND
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