| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1524 |
|---|
| Symbol | |
|---|
| ID | 8367964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1812150 |
|---|
| End bp | 1812698 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644983959 |
|---|
| Product | protein tyrosine/serine phosphatase |
|---|
| Protein accession | YP_003141630 |
|---|
| Protein GI | 256820351 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA ATCTAATACT TTACTTTCTA TTATTCTCTT TTATCTCATT ATGGGGGCAA
CAAAAAGCTA CTCTTATTCA CGCAGATGCT AACTTGTATA AGGTAGACAG TCTGCTTTAC
AGAAGTGAAC AATTAGTAAA TGAAGACAAG AAGATTATCA AAAAGATACC TATTAAAACT
ATCATTAATC TACGCTATTT TACTCGTTCA GGAGACAAGA AGATTTTCCA CGCCTCTGAA
GGTATCAAGC TTATCAATCA CCCGTTACTT ACTTGGCGTA TCAAAGCTCC TGAAATAGCA
AGTGTACTAA AACTAATTCG CAAACATCAA AACGAAGGAG CGGTACTTAT TCACTGTTAT
CACGGCGCTG ATCGTACAGG TATTATGGTA GCAATGTATA GAATTATCTA TGAAGATTGG
AGTATAGCCG ATGCTAAAAA TGAGATGCTC AATGGACCTT ACGGCTATCA CAGTGTCTGG
AAAAACTTAG AAGCCTTGTT CACCGAAAGT ACTGTTGCCG AAGTACGTAA GCACTTAGGA
ATAAAATAG
|
|---|
| Protein sequence | MKKNLILYFL LFSFISLWGQ QKATLIHADA NLYKVDSLLY RSEQLVNEDK KIIKKIPIKT
IINLRYFTRS GDKKIFHASE GIKLINHPLL TWRIKAPEIA SVLKLIRKHQ NEGAVLIHCY
HGADRTGIMV AMYRIIYEDW SIADAKNEML NGPYGYHSVW KNLEALFTES TVAEVRKHLG
IK
|
|---|
| |