Gene Coch_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1519 
Symbol 
ID8367959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1804413 
End bp1805276 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content40% 
IMG OID644983954 
Producthypothetical protein 
Protein accessionYP_003141625 
Protein GI256820346 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.109074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAT TAGTAATTTT AGCGGCAGGT TTAGGAAGTC GCTTTGGTTC AGACAAGCAG 
TTAGAAAATA TTCACAATGG CAATGCTTTG TTTGATTACG GTATTTACGA CGCTCTACAA
GCTGGTTTCG ACAATGTAGT ACTCATTATC CGTCGTGAAA TCGACGATTT AGCACGCCAA
CACTTAGAAA ATCGATTCAA TAATGTGCCC ATTACTTATG TATATCAAGA CGATTTTAAC
CCAAAAGGCA TCGAACGTAA AAAACCTTGG GGTACAGGGC ACGCTATGCT TTGTGTAAAA
GAGTTTGTAA AAAACCCATT CCTCATCATC AATGCCGATG ATTATTATGG CAAAGAAGGC
TTTCGTTTAA TGTACAAAGC GCTCAATGCT GGTAAAGAAA AAACGTTCTT CTCAGGAGGA
TATCTACTAA AAAACACCCT TAGTGAAAAC GGAACTGTTT CACGCGGTAT CTGCGAAGTA
GACGCCAATC ACCACCTACT CTCTATCAAC GAAGCTACCA AACTGCGTAA AATTAACGAA
ACTACTGCTA TCGATGAGGC TACAGGCACC GAGTATCCCC TAAGCACCTA CGTATCTATG
AACTTCTGGG GATTTACTCA CGAAGTATTG GATATAGCCG ACCGTTATTT CAAAGAATTT
GTAGCCGAAC ATAAAGATGA CCCTAAATCC GAATTTTATA TCCCTATGGT AGTACAACAC
GCCATTAAGG ATTACGGATA TAAATTAGAA GTATTACCCA ATCACGACAA CTGGTTCGGT
ATGACCTATC ACGAAGACCT CGCAATGGTA CAAAACGAAA TACAAAAACT CGTAGATAAA
GGCGAGTACC CCGATAGGTT CTAA
 
Protein sequence
MTTLVILAAG LGSRFGSDKQ LENIHNGNAL FDYGIYDALQ AGFDNVVLII RREIDDLARQ 
HLENRFNNVP ITYVYQDDFN PKGIERKKPW GTGHAMLCVK EFVKNPFLII NADDYYGKEG
FRLMYKALNA GKEKTFFSGG YLLKNTLSEN GTVSRGICEV DANHHLLSIN EATKLRKINE
TTAIDEATGT EYPLSTYVSM NFWGFTHEVL DIADRYFKEF VAEHKDDPKS EFYIPMVVQH
AIKDYGYKLE VLPNHDNWFG MTYHEDLAMV QNEIQKLVDK GEYPDRF