Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1519 |
Symbol | |
ID | 8367959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1804413 |
End bp | 1805276 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644983954 |
Product | hypothetical protein |
Protein accession | YP_003141625 |
Protein GI | 256820346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.109074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAT TAGTAATTTT AGCGGCAGGT TTAGGAAGTC GCTTTGGTTC AGACAAGCAG TTAGAAAATA TTCACAATGG CAATGCTTTG TTTGATTACG GTATTTACGA CGCTCTACAA GCTGGTTTCG ACAATGTAGT ACTCATTATC CGTCGTGAAA TCGACGATTT AGCACGCCAA CACTTAGAAA ATCGATTCAA TAATGTGCCC ATTACTTATG TATATCAAGA CGATTTTAAC CCAAAAGGCA TCGAACGTAA AAAACCTTGG GGTACAGGGC ACGCTATGCT TTGTGTAAAA GAGTTTGTAA AAAACCCATT CCTCATCATC AATGCCGATG ATTATTATGG CAAAGAAGGC TTTCGTTTAA TGTACAAAGC GCTCAATGCT GGTAAAGAAA AAACGTTCTT CTCAGGAGGA TATCTACTAA AAAACACCCT TAGTGAAAAC GGAACTGTTT CACGCGGTAT CTGCGAAGTA GACGCCAATC ACCACCTACT CTCTATCAAC GAAGCTACCA AACTGCGTAA AATTAACGAA ACTACTGCTA TCGATGAGGC TACAGGCACC GAGTATCCCC TAAGCACCTA CGTATCTATG AACTTCTGGG GATTTACTCA CGAAGTATTG GATATAGCCG ACCGTTATTT CAAAGAATTT GTAGCCGAAC ATAAAGATGA CCCTAAATCC GAATTTTATA TCCCTATGGT AGTACAACAC GCCATTAAGG ATTACGGATA TAAATTAGAA GTATTACCCA ATCACGACAA CTGGTTCGGT ATGACCTATC ACGAAGACCT CGCAATGGTA CAAAACGAAA TACAAAAACT CGTAGATAAA GGCGAGTACC CCGATAGGTT CTAA
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Protein sequence | MTTLVILAAG LGSRFGSDKQ LENIHNGNAL FDYGIYDALQ AGFDNVVLII RREIDDLARQ HLENRFNNVP ITYVYQDDFN PKGIERKKPW GTGHAMLCVK EFVKNPFLII NADDYYGKEG FRLMYKALNA GKEKTFFSGG YLLKNTLSEN GTVSRGICEV DANHHLLSIN EATKLRKINE TTAIDEATGT EYPLSTYVSM NFWGFTHEVL DIADRYFKEF VAEHKDDPKS EFYIPMVVQH AIKDYGYKLE VLPNHDNWFG MTYHEDLAMV QNEIQKLVDK GEYPDRF
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