Gene Coch_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1508 
Symbol 
ID8367946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1790529 
End bp1791152 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content40% 
IMG OID644983942 
ProductRhodanese domain protein 
Protein accessionYP_003141615 
Protein GI256820336 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TAATCACTAT GAGTACACTG ATATTATGTA GTGTAACTGC GCAAGCACAG 
ACTTTAGCTG AGCGTATCAA CGCTAGCAAC GTAACCCTTG TGGATGTACG TACTCCAAAA 
GAATATGCCG CGGGGACTGC TGAAGGAGCC ATTAATATTC CTTTGGAAGA GATGGGTGCC 
CGATGGCAAG AACTAAAAGG AAAAGAGAAT ATCGTTCTCT TTTGCCGTCG CGGTATACGC 
GCTGGCAAAG CACAGGACAT TCTTAAAATG CACAACATTA CAGCTGTGAA TGGCAAAACA 
GTAGAACACG TAAAGTCGTT ACAGAAAGTA AACTTAGCCG ATAAGCTCAC TTTTAAGACT 
GATAAACCTA CTACTTATTT TGTAAAAGAT GGTAAAAATG TGAGACAAGT AGCCATAGCT 
TTAGGTGAAG GAGGAGTGCT GAAAAAACAC ACTACCAGTA TCCCTGCAAC CCTTATTATG 
GTGAAAGGAA CTGTACGTTT TCTTATCAAT GGAGAAGAAA TTGTGCTTAA AGACCTCGAT 
ACCTATCAAA TACCCGTAGA TGTAGAACAC GAAGTGATAG GAGTAGAGAA AGAAAATGTA 
TTTATAGTTA CTAAGGGGGA TTAA
 
Protein sequence
MKFIITMSTL ILCSVTAQAQ TLAERINASN VTLVDVRTPK EYAAGTAEGA INIPLEEMGA 
RWQELKGKEN IVLFCRRGIR AGKAQDILKM HNITAVNGKT VEHVKSLQKV NLADKLTFKT 
DKPTTYFVKD GKNVRQVAIA LGEGGVLKKH TTSIPATLIM VKGTVRFLIN GEEIVLKDLD 
TYQIPVDVEH EVIGVEKENV FIVTKGD