| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1488 |
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| Symbol | |
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| ID | 8367925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1769430 |
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| End bp | 1771460 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983921 |
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| Product | putative site-specific recombinase |
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| Protein accession | YP_003141595 |
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| Protein GI | 256820316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4389] Site-specific recombinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCGAT TCGCAAAAGA ATATAAATCT ATTTATGAAA TCTTTGAGAC TTATATGCAC
TCATCAGACT ATGAAGATAT TGACTTCGTG TTTGATGTAG TGAACTACTT TCGTCGTAAA
AGTAAAAATA AAAAGTCTCC TCTCAATATC GATGAACTCA TCGCTGAAAT CAAACACAAA
TCTGATAGCA TCGCTTTCTT CAAGGAAAAA CTCCATAACG TATTTGCTAA TAAACAAAAA
GTAATTCTTT TTACTGATGC TGGTCTGCTT AACAGTGTTT CTTTCTTCAA AGAATTGCGT
CGTCGTATCA GTCGTCAGCT TTTGCCCGAC CAGCCTTCGG AAGAGAATAT ACAATACGTA
CTCAACCAAC TCTTCTACCG TCCTTCCGAT GTGAAGTGGG TACATCAAAT TCCTTTAGAT
AACTGGAAAG AACTCTTTGA TATTCTTGCT GTATCTACTT TCTATGAGGA TAGTGAGAGC
AAAACTACTT CCAAGCAAAT CCTTTTGGCG ATAATGATTC TCTCACAACG TATGGGAGGG
CTCGCCTTGC AAACTGATGT GCGCCGTATG GTGCCTGAAT ATGCTCACCT CAATAGTCCC
TTTATCGCTC TCGACGATGA GCTGAACAAT CTTGCACGTA CTCTTTCCAA GGAAGATAAC
CCTTATCTAT ATATACAAGA CCACGAACTT GATTATAAAC AGCTGAATAT ACTAGTTGGT
CAGTGTGAGG ATTTCGTAAA CAAAGCTGAT GCTAATACTT CTAAATATGG GGTGAGTTTT
AGTGTGAACC AAACTCTTTT GCTCATTCGT CAGCAAATAA AACGCATCAA GCGACTCTAT
AACTACCTGT TTATAGAAAA AGAAGCTGAT AAATGTGAAA AAACGATTGC CTTCTACTTA
GATATGGTGA AAACTAATTC TAAGAAGAAC AATATTCGAA AGCTGATAGA TGATAGTGTT
TATAACATCA CCTACGAGAT TACGAACTAT ACCGGAAAGA CGGGTGAACA CTATATTACT
TCTACTACCG GTGAGTACTT CAAGATGCTC AAAACAGCTT TGTGGGGTGG CGTTATCGTG
GGGTTTATGT GTTTGGTAAA ACTCTATATG TCGATGCAAC CCGACCAAAG TGATTTTTTC
CGTGCGCTGA ACTACAGTTT TAACTACGCT ATTGGTTTTG TGCTCATCTA CCTCACGGGG
TCTACTTTGG CTACCAAACA ACCTGCGATG ACGGCTTCCA CGATTGCCAA GACTTTAGAG
AGCCTCAGCG ACAACGATAA CAATAAAGAA AAACAGAAAC ACTACACCGA ATTCTCAGCA
CTCTTTACAC GTTTGTTCCG TTCGCAGTTC ATCGCCTTTG TAGGCAATGT GTTTGGAGCT
TTTCCTGTGT CTATGCTTTT GGCGATAGGA ATGAGTTACC TCAGTGGTTA CAATATCGCT
ACTAAAAAAA GTTTACATCT CTTGGAAGAC CTGAATATAT GGCACACCCC TGTATTTTTG
CACGCTTGTA TTGCAGGGGT ATTTCTGTTC TTATCGGGTA TTATAGCAGG CAACGTAGCT
AGTGTAAATA ACTTTAACAA CTTCTATTAT CGTCTTTCCG AACACCCCTT TCTTAAAGGC
TTCTTTGGTA AAGTACGTAT GCAACGCGTT GCTAACTGGA TGCAACAAAA ATGGCCGAGT
GTCGTCTCAA ATATTTGGTT TGGAGTCTTT ATGGGAAGTG CGTGGGCAAT AGGTCATTTC
TTCGGTTTGC CCATCGATAT ACGCCACATC ACCTTTGCCA GTGGTAATTT AGCTTATGGC
TTGTATGGTA TGAATTTTAT CATTAGCTTA GAGAATATCC TTTGGTGTAT CTTAGGGATA
GGCATCATCG GTTTAGGTAA CTTTATTGTG AGTTTTGGTC TGTCGCTATG GATAGCCTTG
CGTTCTCGTG AAGTACCTGC TTCAGAACTA AAATATTTAG GTCGTTGCGT ATGGAGAGCC
TTTAAAACAC ATCCTAGAGC CTTTTTCTTT CCTGTAAAGG AGAAAGAATA A
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| Protein sequence | MLRFAKEYKS IYEIFETYMH SSDYEDIDFV FDVVNYFRRK SKNKKSPLNI DELIAEIKHK
SDSIAFFKEK LHNVFANKQK VILFTDAGLL NSVSFFKELR RRISRQLLPD QPSEENIQYV
LNQLFYRPSD VKWVHQIPLD NWKELFDILA VSTFYEDSES KTTSKQILLA IMILSQRMGG
LALQTDVRRM VPEYAHLNSP FIALDDELNN LARTLSKEDN PYLYIQDHEL DYKQLNILVG
QCEDFVNKAD ANTSKYGVSF SVNQTLLLIR QQIKRIKRLY NYLFIEKEAD KCEKTIAFYL
DMVKTNSKKN NIRKLIDDSV YNITYEITNY TGKTGEHYIT STTGEYFKML KTALWGGVIV
GFMCLVKLYM SMQPDQSDFF RALNYSFNYA IGFVLIYLTG STLATKQPAM TASTIAKTLE
SLSDNDNNKE KQKHYTEFSA LFTRLFRSQF IAFVGNVFGA FPVSMLLAIG MSYLSGYNIA
TKKSLHLLED LNIWHTPVFL HACIAGVFLF LSGIIAGNVA SVNNFNNFYY RLSEHPFLKG
FFGKVRMQRV ANWMQQKWPS VVSNIWFGVF MGSAWAIGHF FGLPIDIRHI TFASGNLAYG
LYGMNFIISL ENILWCILGI GIIGLGNFIV SFGLSLWIAL RSREVPASEL KYLGRCVWRA
FKTHPRAFFF PVKEKE
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