| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1417 |
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| Symbol | valS |
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| ID | 8367849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1656684 |
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| End bp | 1659320 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983845 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003141524 |
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| Protein GI | 256820245 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAC CCAAAAAATA CAACCCTACT GATTTAGAAG AAAAATGGTA TGCCTATTGG
CTTGCCCACA ACTATTTTCA CTCAACCCCC GATGAGCGTA CACCCTATAC CATTGTGATT
CCACCCCCTA ACGTTACAGG GGTGCTCCAT ATGGGGCATA TGCTCAACAA CACCATTCAA
GATGTACTTA TTCGTCGTGC ACGCCTCAAA GGCTTCAACG CTTGCTGGGT ACCAGGTACT
GACCACGCTT CGATTGCAAC AGAAGCCAAA GTGGTGGCAA AACTCAAAGA ACAAGGCATT
AAGAAATCCG ACCTCACTCG CGAAGAGTTC CTTGTACACG CGTGGGAATG GACACACCAA
TACGGTGGGG TGATTCTCGA ACAACTCAAA AAATTGGGTT GCTCTTGCGA CTGGGAACGC
ACTAAATTCA CTATGGACGA GGAACTTTCG GCTTCGGTTA TCAAAGTGTT TGTGGATTTG
TACAACAAAG GACAAATATA CCGCGGTCAC CGTATGGTGA ACTGGGATCC AGAGGCGAAA
ACCACCCTTT CTGACGAGGA GGTGATTTAT GAAGAACGTC AAGGATTTTT ATATTATTTG
AAATATCAAA TTGAAGGCAC TAATGAGTAC CTTATAATCG CTACAACGCG CCCTGAAACC
ATTTTTGGCG ATACGGCTAT CTGCATCAAC CCTAACGATG AGCGTTGGCA ACACCTCAAG
GGCAAAAAAG CGATTGTGCC TATCTGCAAC CGCGTGATTC CGATTATCGA AGATGAGTAC
GTAGATGTAG AGTTTGGTAC AGGTTGCCTG AAAGTAACCC CTGCACACGA CCCTAACGAC
AAGGTTTTGG GCGACAAACA TCAGTTGGAA GTAATTGATA TTTTCAATGA TGATGCAACT
CTTAATCACT ATGGTTTGCA CTATGCGGGC AAAGACCGCT TTGTAGTGCG CAAAGAGATA
GTAGCCGAAT TAGAAGAAAA AAACTTACTC GCTAAAAAAG AGACCTATAC TAACAAAGTG
GGGACATCTG AGCGTACCAA AGCCGTGATA GAACCCCGCC TTTCTGACCA GTGGTTCCTA
AAAATGGACA CCCTTATCCA GCCAGCTATC AAGGCGGTAT TGGAAGACGA AAGCATCAAA
CTATATCCTA AGAAATTCGA AAATACTTAT CGCCATTGGG TAGAGAATGT ACGCGATTGG
AATATCTCAC GCCAATTGTG GTGGGGACAA CAAATTCCTG CTTACTACTA CGGCGAGGGT
AAAGACCAAT TTGTAGTAGC CAAAACTAAG GCAGAAGCCC TCGCTTTGGC TAAAGAAAAG
AGCGGCAATG CACATCTTAC TGAAGCCGAT TTGCGACAAG ATGAAGATGC TCTCGATACT
TGGTTCTCGT CTTGGTTATG GCCAATGAGT GTTTTCAACG GTATTTTAGA GCCTAATAAT
CCTGAAATCG AGTATTATTA CCCAACCAAC GATTTGGTAA CAGGACCTGA TATCCTTTTC
TTCTGGGTAA CCCGAATGAT AGTAGCAGGT TATGAGTACA AAGGTGAGCG TCCGTTTAGC
AATGTGTATC TTACCGGATT GGTACGCGAC AAGCAACGTC GCAAGATGTC TAAATCCTTA
GGTAACTCGC CCGATGCGCT CAAACTCATC TCCGATTACG GTGCTGATGG CGTGCGCGTG
GGGCTCTTGC TCTCATCGGC AGCAGGTAAT GACTTACTGT TTGATGAAGC CCTTTGTCAA
CAAGGAAAAG GATTTGGCAA CAAATTGTGG AATGCCTTCC AATTGGTAAA AGGCTGGCAA
GTGGATAGCT CGGTAGCACA ACCTACAGCT GCTCAGCTCG CTTTGCAATG GTTTGAAGCG
AAGTTCAACG CGGTACTCAC CGAAGTAGAA GACCATTTTG AGAAATATCG CATCTCCGAT
GCTCTAATGG CAATCTATAA ACTCGCCTGG GACGACTTCT GCGCGTGGCT TTTGGAAATG
GTAAAACCTG AATACGGCAA ACCAATGGAC AAAGCAACTT ACGAGGGAGT GGTAGCAGCT
TTTGAGAATT TACTAAAACT CCTCCACCCC TTTATGCCTT TCCTCACCGA AGAAATATGG
CAAAGTTTAG CCCCTCGTAC CCCTGAACAA GCCCTTATCG TGGCTACCTA CCCTACCGTA
CAGCCGTACG ACGAAAAACT ATTGGCAGAA TTTGATTTTG CTGCCGAAGT GATAGCAGGT
ATCCGCACGG TGCGCAAAGA GAAGAATATA CCTTTCAAAA CACCGCTTAG CCTTTCAGTA
TTAAACAAAG AGCAAATGAG CAATCGTTTT GATGTGGTAC TTAGCAAAAT GGGCGGACTT
GAGGCTATTA CCGAAGTAAG TACAGCCATA GAAGGCGCAA TGTCTTTCCG CGTAAAAGCT
AATGAATACT TTATTCCAAT GGAAGGCGCG GTGAATGTAG AAGAGGAACT CAAAAAACTA
CAAGAGGAAC TCACCTATAC ACAAGGCTTT TTAGCATCGG TACGCAAGAA ACTTTCTAAT
GAGAAATTCG TAAATTCAGC GCCTGCCCAA GTAGTAGACA ACGAGCGCAA AAAAGAAGCT
GATGCGTTAG CAAAAATTGA AACACTTGAA AAAGCAATAA AAGCAATTAA CAATTGA
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| Protein sequence | MTEPKKYNPT DLEEKWYAYW LAHNYFHSTP DERTPYTIVI PPPNVTGVLH MGHMLNNTIQ
DVLIRRARLK GFNACWVPGT DHASIATEAK VVAKLKEQGI KKSDLTREEF LVHAWEWTHQ
YGGVILEQLK KLGCSCDWER TKFTMDEELS ASVIKVFVDL YNKGQIYRGH RMVNWDPEAK
TTLSDEEVIY EERQGFLYYL KYQIEGTNEY LIIATTRPET IFGDTAICIN PNDERWQHLK
GKKAIVPICN RVIPIIEDEY VDVEFGTGCL KVTPAHDPND KVLGDKHQLE VIDIFNDDAT
LNHYGLHYAG KDRFVVRKEI VAELEEKNLL AKKETYTNKV GTSERTKAVI EPRLSDQWFL
KMDTLIQPAI KAVLEDESIK LYPKKFENTY RHWVENVRDW NISRQLWWGQ QIPAYYYGEG
KDQFVVAKTK AEALALAKEK SGNAHLTEAD LRQDEDALDT WFSSWLWPMS VFNGILEPNN
PEIEYYYPTN DLVTGPDILF FWVTRMIVAG YEYKGERPFS NVYLTGLVRD KQRRKMSKSL
GNSPDALKLI SDYGADGVRV GLLLSSAAGN DLLFDEALCQ QGKGFGNKLW NAFQLVKGWQ
VDSSVAQPTA AQLALQWFEA KFNAVLTEVE DHFEKYRISD ALMAIYKLAW DDFCAWLLEM
VKPEYGKPMD KATYEGVVAA FENLLKLLHP FMPFLTEEIW QSLAPRTPEQ ALIVATYPTV
QPYDEKLLAE FDFAAEVIAG IRTVRKEKNI PFKTPLSLSV LNKEQMSNRF DVVLSKMGGL
EAITEVSTAI EGAMSFRVKA NEYFIPMEGA VNVEEELKKL QEELTYTQGF LASVRKKLSN
EKFVNSAPAQ VVDNERKKEA DALAKIETLE KAIKAINN
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