| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1370 |
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| Symbol | ddl |
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| ID | 8367801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1609110 |
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| End bp | 1610087 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983797 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_003141477 |
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| Protein GI | 256820198 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.675036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA ATATAGCAAT CATAATGGGA GGATACTCTA ATGAAGCTCC CGTTTCTTTA
AAAAGTGCTG CAGTAGTAGC CAAAAACCTC AACCAAGATA AATATGTACC TTACCCCGTG
CGTATCGACC GTGATAAATG GGTGTATGTA GATACTCAAA ACAACGAACA CCCTATTGAT
AAAAACGACT TCTCGGTAAC AGTAAACGGA CGTAAAATTA CTTTTGATGC TGTTTTCAAT
GCTATTCACG GCACCCCAGG TGAAGACGGT TATTTACAAG CCTATTTCAA TTTGATTGGC
TTACCGCTCA CAGGGTGCAG TATGTATGCT TCGGCTCTTA CTTTCAACAA ACGTGATATG
CTATCGGTAC TCAAACCTTT CGGAATTCTT TCAGCCCCTT CTTACTATCT CAACAAAGGT
GAAGACTACA ACACTGCTGA TATTGTGGCC AAAGTAGGCT TGCCTTGCTT TGTGAAGGCT
AATAAATCAG GGAGTAGTTT TGGAGTGTAT AAAGTATATG AAGAGGCTCA ACTGCCTATG
TATATAGACA AAGCATTTGA AGTAGACGAC GAAATCCTCA TCGAAACTTT CTTGAAAGGT
ACTGAAATCT CTATCGGGGT AATCAACTAT CGCGGGAAAA TAAAAGTTCT TCCAATGACT
GAGATTGTAT CCGAGAATGA TTTCTTCGAT TATGATGCCA AGTATAACGG CAAGTCGCAA
GAAATTACCC CTGCGCGCCT TTCTGCCGAA ATGACTGCTA AAATCAACGC TTTGGCGGAA
CGTGTATACC GATTGTTAAA AATGGAAGGT TTCAGCCGAA GTGAGTTTAT CATAGTAGGC
GATACACCTT ATTTGCTTGA AATGAATACC ACACCAGGGC TTTCAGAAGC TAGTTTACTG
CCTCAACAAG CTAAAGTAGC TGGTATTAGC CTTGAAGAAC TATTCGAAAG CGAAATTGAA
CGAGTATTGA ATCACTAA
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| Protein sequence | MKKNIAIIMG GYSNEAPVSL KSAAVVAKNL NQDKYVPYPV RIDRDKWVYV DTQNNEHPID
KNDFSVTVNG RKITFDAVFN AIHGTPGEDG YLQAYFNLIG LPLTGCSMYA SALTFNKRDM
LSVLKPFGIL SAPSYYLNKG EDYNTADIVA KVGLPCFVKA NKSGSSFGVY KVYEEAQLPM
YIDKAFEVDD EILIETFLKG TEISIGVINY RGKIKVLPMT EIVSENDFFD YDAKYNGKSQ
EITPARLSAE MTAKINALAE RVYRLLKMEG FSRSEFIIVG DTPYLLEMNT TPGLSEASLL
PQQAKVAGIS LEELFESEIE RVLNH
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