Gene Coch_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1358 
Symbol 
ID8367789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1598142 
End bp1599236 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content41% 
IMG OID644983785 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_003141465 
Protein GI256820186 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.567069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC TACAAGCGTT ATTTATAGTA CTATTGTGTA GTGCCTGTTT TACTTATGCA 
CAAAAGCCAT CTCGTATTGG CTATGTGGAT ATGGATTACA TATTATCACA CCTCGAAGAT 
TATAAAGTAG CAAGCCAGCA GTTTGCCTTA CAAGTAGAGC AATGGGAGGC TGAAATAGCC 
AAGCGCCAAG AAAAGATAAA GGCTGAAAAA GATAAGTTAG AAGCTGAGAA AGCTTTACTT 
ACTCCCGAGC TTATCAAAGA TAAAGAAGAA GAAATAGCTC TGTTAGAATA CAACTTGAAT 
GCCTATAAAC AGCAGAAGTT TGATGCTAAG GAAGGAGAGT ATATCACCCA AAAGTTTATG 
CTTGCTAAGC CTATCCAAGA CCAAGTGTTT AATATAGTGC AAGAGATAGG CAAGATGCGT 
AAATACGACT TTATCTTTGA AAAGAGTGAT GCCACTATGT TATTCTCTAA TGAGCAACAT 
AACTTGAGTA AAGTAGTGCT TCGTGCCTTG AAGAAGAAAG ACAATGCCGA AGATAGGAAC 
AAAGATATGG CTCAGCTCTT AAAAGAAAGC TATGATTTTG AGTTTGTAGA AGAACGCGTT 
AAGAAACGTA AAGAAGCTGA AAAAGCACGT GAGCAACGCC GAGTACAATA CGAACAAGAA 
CGTTTGCGCA AGACTGAAGA AATGAAGCAA CAGCGCGAAC AGCTCAAAGC GAAACGCGAG 
AAAGAACAAG CCGAGCGTCA GCAGAAGTTC CAACAAGAAC GAGACGCCCT TAAAGCGCAA 
CGCGAAAAAG AACAAGCCGA ACGTGTACAG AAATTCCAAC AAGAGCGCGA TGCCCTTAAA 
GCACAACGTG AGAAAGAGCA AGCTGAGCGT CAGCAGAAGT TCCAACAACA GCGCGATTCT 
ATAAAGGCGC AACGCGACAA AGAACAAACC GAACGCCAAC AGAAGTTACA AGAACAGAAA 
GAACAGCGTG AGAAGGAAAT AGCTGAACGC CAAAAGAAAC TTGAAGAGCA AAGGGTGCAA 
CGTGAAAAAG AACAAGCCGA GCGCCTTAAA AAACAACAAG AGGCGAGAAC ACAAACGCCT 
ACAACAAATC AGTAA
 
Protein sequence
MNKLQALFIV LLCSACFTYA QKPSRIGYVD MDYILSHLED YKVASQQFAL QVEQWEAEIA 
KRQEKIKAEK DKLEAEKALL TPELIKDKEE EIALLEYNLN AYKQQKFDAK EGEYITQKFM 
LAKPIQDQVF NIVQEIGKMR KYDFIFEKSD ATMLFSNEQH NLSKVVLRAL KKKDNAEDRN 
KDMAQLLKES YDFEFVEERV KKRKEAEKAR EQRRVQYEQE RLRKTEEMKQ QREQLKAKRE 
KEQAERQQKF QQERDALKAQ REKEQAERVQ KFQQERDALK AQREKEQAER QQKFQQQRDS 
IKAQRDKEQT ERQQKLQEQK EQREKEIAER QKKLEEQRVQ REKEQAERLK KQQEARTQTP 
TTNQ